RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 RAB9BQ9NP90 201 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 MBNL3Q9NUK0 354 aaKnown RBP15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 TRAPPC2LQ9UL33 140 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 SVEP1Q4LDE5 3571 aa15.53■□□□□ 0.08
CTDSP1-207ENST00000473420 TRBV6-6A0A0A6YYG2 114 aa15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 IGHV1-69DA0A0B4J2H0 117 aa15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 SERPINE3A8MV23 424 aa15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 NPIPB11E5RHQ5 1161 aa15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 ZNF701M0R085 212 aaPredicted RBP15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 MFNGO00587 321 aa15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 IGHV1-69P01742 117 aa15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 HIST1H1DP16402 221 aaKnown RBP15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 SOX6P35712 828 aa15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 HCP5Q6MZN7 132 aa15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 MOB1BQ7L9L4 216 aa15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 OR4K15Q8NH41 348 aa15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 PHF21AQ96BD5 680 aa15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 CYYR1Q96J86 154 aa15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 AK3Q9UIJ7 227 aa15.52■□□□□ 0.08
CTDSP1-207ENST00000473420 MXRA5Q9NR99 2828 aa15.52■□□□□ 0.07
CTDSP1-207ENST00000473420 CDK2P24941 298 aa15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 FPR2P25090 351 aa15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 KLRD1Q13241 179 aa15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 ZNF880Q6PDB4 577 aa15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 ZNF782Q6ZMW2 699 aaPredicted RBP15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 RTN4RL2Q86UN3 420 aa15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 OR13D1Q8NGV5 346 aa15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 DYNC2LI1Q8TCX1 351 aa15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 CCDC107Q8WV48 283 aa15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 MS4A7Q9GZW8 240 aaPredicted RBP15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 TMEM133Q9H2Q1 129 aa15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 C12orf4Q9NQ89 552 aa15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 CCDC59Q9P031 241 aaKnown RBP15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 ZNF69Q9UC07 566 aa15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 KCNK7Q9Y2U2 307 aa15.51■□□□□ 0.07
CTDSP1-207ENST00000473420 IGHV3OR16-10A0A075B7F0 116 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 A0A087X0M5 115 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 TRAV39A0A0B4J263 110 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 SMIM31A0A1B0GVY4 71 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 A0A1B0GX30 115 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 C15orf65H3BRN8 121 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 SSTR5P35346 364 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 DLX1P56177 255 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 TUSC1Q2TAM9 212 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 TMEM30BQ3MIR4 351 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 PRAMEF5Q5TYX0 476 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 MZT2AQ6P582 158 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 SAMD12Q8N8I0 201 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 ARL11Q969Q4 196 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 KIRREL1Q96J84 757 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 CMSS1Q9BQ75 279 aaKnown RBP15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 CHMP1AQ9HD42 196 aaPredicted RBP15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 DIABLOQ9NR28 239 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 IDI2-AS1Q9NZ38 188 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 KCNIP1Q9NZI2 227 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 RSL24D1Q9UHA3 163 aaKnown RBP15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 MGAT4AQ9UM21 535 aa15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 NIPBLQ6KC79 2804 aaeCLIP15.5■□□□□ 0.07
CTDSP1-207ENST00000473420 CCDC160A6NGH7 325 aa15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 MMP23AO75900 390 aa15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 GSTP1P09211 210 aaKnown RBP15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 CD3GP09693 182 aa15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 GNB3P16520 340 aa15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 RCC1P18754 421 aaPredicted RBP15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 CD34P28906 385 aa15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 MRPS15P82914 257 aaKnown RBP15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 MIDNQ504T8 468 aa15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 OLFML2AQ68BL7 652 aa15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 BRD3OSQ6XYD6 125 aa15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 OR11H6Q8NGC7 330 aa15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 OR52M1Q8NGK5 317 aa15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 S100A16Q96FQ6 103 aaKnown RBP15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 NDUFA13Q9P0J0 144 aa15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 COMMD3Q9UBI1 195 aa15.49■□□□□ 0.07
CTDSP1-207ENST00000473420 C12orf77C9JDV5 145 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 F2RL2O00254 374 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 NPFFO15130 113 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 SPINT2O43291 252 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 APOA1P02647 267 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 OMGP23515 440 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 GDNFP39905 211 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 PNLIPRP3Q17RR3 467 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 ZNF260Q3ZCT1 412 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 CDNFQ49AH0 187 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 RUSC1-AS1Q66K80 236 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 PDZD9Q8IXQ8 264 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 PNKDQ8N490 385 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 SUCNR1Q9BXA5 334 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 CLEC7AQ9BXN2 247 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 TAF9BQ9HBM6 251 aa15.48■□□□□ 0.07
CTDSP1-207ENST00000473420 A0A075B6Q4 140 aa15.47■□□□□ 0.07
CTDSP1-207ENST00000473420 IGHV2-26A0A0B4J1V2 119 aa15.47■□□□□ 0.07
CTDSP1-207ENST00000473420 ODF3BA8MYP8 253 aa15.47■□□□□ 0.07
CTDSP1-207ENST00000473420 COX7A1P24310 79 aa15.47■□□□□ 0.07
CTDSP1-207ENST00000473420 PITPNAQ00169 270 aa15.47■□□□□ 0.07
CTDSP1-207ENST00000473420 PRB3Q04118 309 aaPredicted RBP15.47■□□□□ 0.07
CTDSP1-207ENST00000473420 HMGN3Q15651 99 aa15.47■□□□□ 0.07
CTDSP1-207ENST00000473420 HACD4Q5VWC8 232 aa15.47■□□□□ 0.07
CTDSP1-207ENST00000473420 ZNF626Q68DY1 528 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms