RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 C9orf170A2RU37 121 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 A8MV72 311 aaPredicted RBP12.24□□□□□ -0.45
HIF3A-206ENST00000472815 HSPA12AO43301 675 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 ZNF737O75373 536 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 DUS4LO95620 317 aaKnown RBP12.24□□□□□ -0.45
HIF3A-206ENST00000472815 ZBTB25P24278 435 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 S100GP29377 79 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 FXYD4P59646 89 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 DHODHQ02127 395 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 AESQ08117 197 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 BAMBIQ13145 260 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 PPP1R1AQ13522 171 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 STUMQ69YW2 141 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 SGPP2Q8IWX5 399 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 ZNF565Q8N9K5 539 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 UXS1Q8NBZ7 420 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 OR2AK2Q8NG84 335 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 OR11H7Q8NGC8 314 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 SDSLQ96GA7 329 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 ZNF436Q9C0F3 470 aaPredicted RBP12.24□□□□□ -0.45
HIF3A-206ENST00000472815 RAB1BQ9H0U4 201 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 CBLN4Q9NTU7 201 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 KIF25Q9UIL4 384 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 TANC2Q9HCD6 1990 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 FLNCQ14315 2725 aa12.24□□□□□ -0.45
HIF3A-206ENST00000472815 ROS1P08922 2347 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 PPIAL4EA0A075B759 164 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 TRBV6-7A0A0A0MS04 114 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 PPIAL4DF5H284 164 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 K7N7A8 449 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 LGALS8O00214 317 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 SLC22A5O76082 557 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 PPIAL4FP0DN26 164 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 AADACP22760 399 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 NFYAP23511 347 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-206ENST00000472815 HMGN3Q15651 99 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 HFEQ30201 348 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 FAM185AQ8N0U4 392 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 ZCCHC24Q8N2G6 241 aaKnown RBP12.23□□□□□ -0.45
HIF3A-206ENST00000472815 ADAD2Q8NCV1 583 aaKnown RBP12.23□□□□□ -0.45
HIF3A-206ENST00000472815 COQ8AQ8NI60 647 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 MITD1Q8WV92 249 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 IL1F10Q8WWZ1 152 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 CCL17Q92583 94 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 NINJ1Q92982 152 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 GALMQ96C23 342 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 LURAP1Q96LR2 239 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 FYTTD1Q96QD9 318 aaKnown RBP12.23□□□□□ -0.45
HIF3A-206ENST00000472815 VRK1Q99986 396 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-206ENST00000472815 RTBDNQ9BSG5 229 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-206ENST00000472815 TRAF4Q9BUZ4 470 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-206ENST00000472815 TMPRSS13Q9BYE2 586 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 SHARPINQ9H0F6 387 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 FXYD6Q9H0Q3 95 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 NCOR1P1Q9H4R4 102 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 TAF9BQ9HBM6 251 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 TMEM106BQ9NUM4 274 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 KCNIP3Q9Y2W7 256 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 PPIAL4AQ9Y536 164 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 ARFGEF3Q5TH69 2177 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 IGHV1-69-2A0A0G2JMI3 117 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 TMEM178BH3BS89 294 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 SPINT2O43291 252 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 GZMHP20718 246 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 IL2RGP31785 369 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 COQ2Q96H96 371 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 RANBP3Q9H6Z4 567 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-206ENST00000472815 OR6C3Q9NZP0 311 aa12.23□□□□□ -0.45
HIF3A-206ENST00000472815 A0A0B4J2A0 478 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 TEX13DA0A0J9YY54 714 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-206ENST00000472815 NDUFA2O43678 99 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 TUSC2O75896 110 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 SFT2D2O95562 160 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 C1QBP02746 253 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 GIPP09681 153 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-206ENST00000472815 CXCL3P19876 107 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 ERP29P30040 261 aaKnown RBP12.22□□□□□ -0.45
HIF3A-206ENST00000472815 EDDM3AQ14507 147 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 HERPUD1Q15011 391 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 CMTM1Q8IZ96 169 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 PRR18Q8N4B5 295 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 CASTOR1Q8WTX7 329 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 DMRTB1Q96MA1 342 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 RSRP1Q9BUV0 290 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 SHPKQ9UHJ6 478 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 METRNQ9UJH8 293 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 OR2W1Q9Y3N9 320 aa12.22□□□□□ -0.45
HIF3A-206ENST00000472815 PKDREJQ9NTG1 2253 aa12.21□□□□□ -0.45
HIF3A-206ENST00000472815 GOSR2O14653 212 aa12.21□□□□□ -0.45
HIF3A-206ENST00000472815 IFNA2P01563 188 aa12.21□□□□□ -0.45
HIF3A-206ENST00000472815 IGFBP2P18065 325 aa12.21□□□□□ -0.45
HIF3A-206ENST00000472815 PI3P19957 117 aa12.21□□□□□ -0.45
HIF3A-206ENST00000472815 RBMXP38159 391 aaKnown RBP12.21□□□□□ -0.45
HIF3A-206ENST00000472815 PIGPP57054 158 aa12.21□□□□□ -0.45
HIF3A-206ENST00000472815 RAP2BP61225 183 aa12.21□□□□□ -0.45
HIF3A-206ENST00000472815 HOXA4Q00056 320 aaPredicted RBP12.21□□□□□ -0.45
HIF3A-206ENST00000472815 ZNF788Q6ZQV5 615 aa12.21□□□□□ -0.45
HIF3A-206ENST00000472815 H1FOOQ8IZA3 346 aaPredicted RBP12.21□□□□□ -0.45
HIF3A-206ENST00000472815 DEFB108BQ8NET1 73 aa12.21□□□□□ -0.45
HIF3A-206ENST00000472815 LIME1Q9H400 295 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms