RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 ABCG5Q9H222 651 aa16.35■□□□□ 0.21
SF1-213ENST00000472725 CALYQ9NYX4 217 aa16.35■□□□□ 0.21
SF1-213ENST00000472725 CEPT1Q9Y6K0 416 aa16.35■□□□□ 0.21
SF1-213ENST00000472725 RNASEK-C17orf49H0YIS7 233 aa16.34■□□□□ 0.21
SF1-213ENST00000472725 IGHV4-38-2P0DP08 117 aa16.34■□□□□ 0.21
SF1-213ENST00000472725 HIST1H1DP16402 221 aaKnown RBP16.34■□□□□ 0.21
SF1-213ENST00000472725 C17orf58Q2M2W7 97 aa16.34■□□□□ 0.21
SF1-213ENST00000472725 TUSC1Q2TAM9 212 aa16.34■□□□□ 0.21
SF1-213ENST00000472725 UBE2NLQ5JXB2 153 aa16.34■□□□□ 0.21
SF1-213ENST00000472725 MZT2AQ6P582 158 aa16.34■□□□□ 0.21
SF1-213ENST00000472725 OR5H6Q8NGV6 325 aa16.34■□□□□ 0.21
SF1-213ENST00000472725 MRPL30Q8TCC3 161 aaKnown RBP16.34■□□□□ 0.21
SF1-213ENST00000472725 MRGPRDQ8TDS7 321 aa16.34■□□□□ 0.21
SF1-213ENST00000472725 DYRK2Q92630 601 aa16.34■□□□□ 0.21
SF1-213ENST00000472725 SLC25A38Q96DW6 304 aa16.34■□□□□ 0.21
SF1-213ENST00000472725 DIABLOQ9NR28 239 aa16.34■□□□□ 0.21
SF1-213ENST00000472725 KCNIP1Q9NZI2 227 aa16.34■□□□□ 0.21
SF1-213ENST00000472725 NDUFA13Q9P0J0 144 aa16.34■□□□□ 0.21
SF1-213ENST00000472725 A0A087X0M5 115 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 A0A1B0GX30 115 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 H3BMQ9 156 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 MFNGO00587 321 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 IFNA2P01563 188 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 GSTP1P09211 210 aaKnown RBP16.33■□□□□ 0.2
SF1-213ENST00000472725 CDK2P24941 298 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 CD34P28906 385 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 MRPS15P82914 257 aaKnown RBP16.33■□□□□ 0.2
SF1-213ENST00000472725 MOGAT2Q3SYC2 334 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 MIDNQ504T8 468 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 RTN4RL2Q86UN3 420 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 OR11H6Q8NGC7 330 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 OR52M1Q8NGK5 317 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 S100A16Q96FQ6 103 aaKnown RBP16.33■□□□□ 0.2
SF1-213ENST00000472725 CMSS1Q9BQ75 279 aaKnown RBP16.33■□□□□ 0.2
SF1-213ENST00000472725 TMEM133Q9H2Q1 129 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 C12orf4Q9NQ89 552 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 AK3Q9UIJ7 227 aa16.33■□□□□ 0.2
SF1-213ENST00000472725 SMIM31A0A1B0GVY4 71 aa16.32■□□□□ 0.2
SF1-213ENST00000472725 SPINT2O43291 252 aa16.32■□□□□ 0.2
SF1-213ENST00000472725 SPCS2Q15005 226 aa16.32■□□□□ 0.2
SF1-213ENST00000472725 HCP5Q6MZN7 132 aa16.32■□□□□ 0.2
SF1-213ENST00000472725 ZNF880Q6PDB4 577 aa16.32■□□□□ 0.2
SF1-213ENST00000472725 OR4K15Q8NH41 348 aa16.32■□□□□ 0.2
SF1-213ENST00000472725 RBM38Q9H0Z9 239 aaKnown RBP16.32■□□□□ 0.2
SF1-213ENST00000472725 IDI2-AS1Q9NZ38 188 aa16.32■□□□□ 0.2
SF1-213ENST00000472725 CCDC59Q9P031 241 aaKnown RBP16.32■□□□□ 0.2
SF1-213ENST00000472725 ZNF69Q9UC07 566 aa16.32■□□□□ 0.2
SF1-213ENST00000472725 KCNK7Q9Y2U2 307 aa16.32■□□□□ 0.2
SF1-213ENST00000472725 A0A0A6YYJ9 748 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 MEX3AA1L020 520 aaKnown RBP16.31■□□□□ 0.2
SF1-213ENST00000472725 C15orf65H3BRN8 121 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 APOA1P02647 267 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 CD3GP09693 182 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 PITPNAQ00169 270 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 PNLIPRP3Q17RR3 467 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 Q3ZCU0 254 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 SAMD12Q8N8I0 201 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 DYNC2LI1Q8TCX1 351 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 CCDC107Q8WV48 283 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 ARL11Q969Q4 196 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 KIRREL1Q96J84 757 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 SUCNR1Q9BXA5 334 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 CLEC7AQ9BXN2 247 aa16.31■□□□□ 0.2
SF1-213ENST00000472725 CHMP1AQ9HD42 196 aaPredicted RBP16.31■□□□□ 0.2
SF1-213ENST00000472725 RSL24D1Q9UHA3 163 aaKnown RBP16.31■□□□□ 0.2
SF1-213ENST00000472725 CCDC160A6NGH7 325 aa16.3■□□□□ 0.2
SF1-213ENST00000472725 F2RL2O00254 374 aa16.3■□□□□ 0.2
SF1-213ENST00000472725 NPFFO15130 113 aa16.3■□□□□ 0.2
SF1-213ENST00000472725 SSTR5P35346 364 aa16.3■□□□□ 0.2
SF1-213ENST00000472725 SRSF7Q16629 238 aaKnown RBP eCLIP16.3■□□□□ 0.2
SF1-213ENST00000472725 CDNFQ49AH0 187 aa16.3■□□□□ 0.2
SF1-213ENST00000472725 PRAMEF5Q5TYX0 476 aa16.3■□□□□ 0.2
SF1-213ENST00000472725 ZNF782Q6ZMW2 699 aaPredicted RBP16.3■□□□□ 0.2
SF1-213ENST00000472725 PRDM13Q9H4Q3 707 aa16.3■□□□□ 0.2
SF1-213ENST00000472725 TBL2Q9Y4P3 447 aaKnown RBP16.3■□□□□ 0.2
SF1-213ENST00000472725 IGHV2-26A0A0B4J1V2 119 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 C12orf77C9JDV5 145 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 XRCC3O43542 346 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 MMP23AO75900 390 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 GNB3P16520 340 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 RCC1P18754 421 aaPredicted RBP16.29■□□□□ 0.2
SF1-213ENST00000472725 KLRD1Q13241 179 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 ZNF260Q3ZCT1 412 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 HACD4Q5VWC8 232 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 ZNF626Q68DY1 528 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 BRD3OSQ6XYD6 125 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 PNKDQ8N490 385 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 ZNF596Q8TC21 504 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 ZNF418Q8TF45 676 aaPredicted RBP16.29■□□□□ 0.2
SF1-213ENST00000472725 TAF9BQ9HBM6 251 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 COMMD3Q9UBI1 195 aa16.29■□□□□ 0.2
SF1-213ENST00000472725 IGHV3OR16-10A0A075B7F0 116 aa16.28■□□□□ 0.2
SF1-213ENST00000472725 TRAV39A0A0B4J263 110 aa16.28■□□□□ 0.2
SF1-213ENST00000472725 ODF3BA8MYP8 253 aa16.28■□□□□ 0.2
SF1-213ENST00000472725 MELTFP08582 738 aa16.28■□□□□ 0.2
SF1-213ENST00000472725 OMGP23515 440 aa16.28■□□□□ 0.2
SF1-213ENST00000472725 DTYMKP23919 212 aa16.28■□□□□ 0.2
SF1-213ENST00000472725 PRRX1P54821 245 aa16.28■□□□□ 0.2
SF1-213ENST00000472725 LGALS4P56470 323 aa16.28■□□□□ 0.2
SF1-213ENST00000472725 RIPPLY3P57055 190 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms