RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 CPNE9Q8IYJ1 553 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 POM121L12Q8N7R1 296 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 NT5CQ8TCD5 201 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 DOK4Q8TEW6 326 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 CCL17Q92583 94 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 RERGQ96A58 199 aaPredicted RBP1.87□□□□□ -2.11
XRN1-210ENST00000472697 MROQ9BYG7 248 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 PLA2G2FQ9BZM2 168 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 OR11A1Q9GZK7 315 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 CMTM6Q9NX76 183 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 SPAG17Q6Q759 2223 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 LAMA3Q16787 3333 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 ZBED9Q6R2W3 1325 aa1.87□□□□□ -2.11
XRN1-210ENST00000472697 HELZ2Q9BYK8 2649 aaKnown RBP1.87□□□□□ -2.11
XRN1-210ENST00000472697 FAM72CH0Y354 149 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 MFNGO00587 321 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 SLC2A1P11166 492 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 ADRB3P13945 408 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 ME2P23368 584 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 CXCR1P25024 350 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 HSD11B1P28845 292 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 RPL12P30050 165 aaKnown RBP1.86□□□□□ -2.11
XRN1-210ENST00000472697 PYCR1P32322 319 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 CXCL5P42830 114 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 P2RX1P51575 399 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 MTPNP58546 118 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 MEF2CQ06413 473 aaPredicted RBP1.86□□□□□ -2.11
XRN1-210ENST00000472697 HNRNPA0Q13151 305 aaKnown RBP1.86□□□□□ -2.11
XRN1-210ENST00000472697 TMEM241Q24JQ0 296 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 HES3Q5TGS1 186 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 FAM72AQ5TYM5 149 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 FAM72DQ6L9T8 149 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 DNM1P46Q6ZS02 220 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 TMEM135Q86UB9 458 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 COMMD7Q86VX2 200 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 FAM72BQ86X60 149 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 BBS7Q8IWZ6 715 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 CADM2Q8N3J6 435 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 ZNF485Q8NCK3 441 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 RXFP4Q8TDU9 374 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 CPNE4Q96A23 557 aaPredicted RBP1.86□□□□□ -2.11
XRN1-210ENST00000472697 TMEM101Q96IK0 257 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 TIMM17AQ99595 171 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 SLC25A2Q9BXI2 301 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 API5Q9BZZ5 524 aaKnown RBP1.86□□□□□ -2.11
XRN1-210ENST00000472697 LHX5Q9H2C1 402 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 HRASLSQ9HDD0 168 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 DPM3Q9P2X0 92 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 ATPIF1Q9UII2 106 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 OR51B4Q9Y5P0 310 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 DOPEY1Q5JWR5 2465 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 SHANK1Q9Y566 2161 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 COL1A2P08123 1366 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 CENPVL3A0A0U1RRI6 287 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 DAPL1A0PJW8 107 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 NDUFAF8A1L188 74 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 SRSF10O75494 262 aaKnown RBP1.86□□□□□ -2.11
XRN1-210ENST00000472697 CALB1P05937 261 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 SEC11BP0C7V7 166 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 TAC1P20366 129 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 ZBTB25P24278 435 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 CXCL12P48061 93 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 CRADDP78560 199 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 TTLL9Q3SXZ7 439 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 CLEC20AQ6ZU45 233 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 COX18Q8N8Q8 333 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 SUMF2Q8NBJ7 301 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 C19orf18Q8NEA5 215 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 OR11L1Q8NGX0 322 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 ZNF420Q8TAQ5 688 aaPredicted RBP1.86□□□□□ -2.11
XRN1-210ENST00000472697 EEF1AKMT1Q8WVE0 214 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 LINC00477Q96M19 166 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 PRAP1Q96NZ9 151 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 RBP7Q96R05 134 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 OR4K3Q96R72 315 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 HOPXQ9BPY8 73 aaPredicted RBP1.86□□□□□ -2.11
XRN1-210ENST00000472697 SLC25A31Q9H0C2 315 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 HEBP1Q9NRV9 189 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 ZNF223Q9UK11 482 aaPredicted RBP1.86□□□□□ -2.11
XRN1-210ENST00000472697 ASF1AQ9Y294 204 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 TP53TG1Q9Y2A0 90 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 USH1CQ9Y6N9 552 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 ENPP4Q9Y6X5 453 aa1.86□□□□□ -2.11
XRN1-210ENST00000472697 A0A0B4J2A0 478 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 IGKV6D-41A0A0C4DH26 115 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 LOC105371267A0A1B0GV96 52 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 PFDN6O15212 129 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 SLC31A1O15431 190 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 IGKV1-39P01597 117 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 IGKV1D-39P04432 117 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 AKR1C4P17516 323 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 RAB3BP20337 219 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 F2RP25116 425 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 IL3RAP26951 378 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 JOSD1Q15040 202 aaPredicted RBP1.85□□□□□ -2.11
XRN1-210ENST00000472697 PDZD11Q5EBL8 140 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 TCTEX1D4Q5JR98 221 aa1.85□□□□□ -2.11
XRN1-210ENST00000472697 TTC33Q6PID6 262 aaPredicted RBP1.85□□□□□ -2.11
XRN1-210ENST00000472697 MRPL52Q86TS9 123 aaKnown RBP1.85□□□□□ -2.11
XRN1-210ENST00000472697 YIPF7Q8N8F6 280 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms