RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 KLHL22Q53GT1 634 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 DEFB121Q5J5C9 76 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 KHDC1LQ5JSQ8 128 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 ATAD3CQ5T2N8 411 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 DMKNQ6E0U4 476 aaPredicted RBP6.36□□□□□ -1.39
USP48-207ENST00000471752 SIGIRRQ6IA17 410 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 ZFP1Q6P2D0 407 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 RPL22L1Q6P5R6 122 aaKnown RBP6.36□□□□□ -1.39
USP48-207ENST00000471752 MOB3BQ86TA1 216 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 OSR2Q8N2R0 312 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 Q8N6K4 173 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 C5orf56Q8N8D9 126 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 OR10V1Q8NGI7 309 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 OR52N1Q8NH53 320 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 TOMM40LQ969M1 308 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 ARL11Q969Q4 196 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 MUL1Q969V5 352 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 ST6GALNAC6Q969X2 333 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 TMEM106AQ96A25 262 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 RPEQ96AT9 228 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 EAF1Q96JC9 268 aaPredicted RBP6.36□□□□□ -1.39
USP48-207ENST00000471752 PGLYRP3Q96LB9 341 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 C9orf16Q9BUW7 83 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 BARHL1Q9BZE3 327 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 KCNK15Q9H427 330 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 BANF2Q9H503 90 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 OR6C3Q9NZP0 311 aa6.36□□□□□ -1.39
USP48-207ENST00000471752 RPL36Q9Y3U8 105 aaKnown RBP6.36□□□□□ -1.39
USP48-207ENST00000471752 TSSC4Q9Y5U2 329 aaPredicted RBP6.36□□□□□ -1.39
USP48-207ENST00000471752 TRBV5-7A0A0A0MS05 114 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 IGHV1-3A0A0C4DH29 117 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 FUOMA2VDF0 154 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 PSMB11A5LHX3 300 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 C12orf77C9JDV5 145 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 RPLP1P05386 114 aaKnown RBP6.35□□□□□ -1.39
USP48-207ENST00000471752 TMEM11P17152 192 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 CNTFRP26992 372 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 BDKRB2P30411 391 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 ZNF93P35789 620 aaPredicted RBP6.35□□□□□ -1.39
USP48-207ENST00000471752 IL13RA2Q14627 380 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 GNMTQ14749 295 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 CT45A1Q5HYN5 189 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 FAM27D1Q5T7N8 215 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 DDI2Q5TDH0 399 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 OR10K2Q6IF99 312 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 ZNF497Q6ZNH5 498 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 OR2W3Q7Z3T1 314 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 THNSL2Q86YJ6 484 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 ZNF565Q8N9K5 539 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 ZNF439Q8NDP4 499 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 OR4K15Q8NH41 348 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 CT45A3Q8NHU0 189 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 GPR148Q8TDV2 347 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 CYGBQ8WWM9 190 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 RAX2Q96IS3 184 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 Q96MT0 163 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 OR14A2Q96R54 314 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 ZNF184Q99676 751 aaPredicted RBP6.35□□□□□ -1.39
USP48-207ENST00000471752 HSPB9Q9BQS6 159 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 METTL9Q9H1A3 318 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 ZNF281Q9Y2X9 895 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 MOB4Q9Y3A3 225 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 HSPE1-MOB4S4R3N1 261 aa6.35□□□□□ -1.39
USP48-207ENST00000471752 UBE2QL1A1L167 161 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 SNTNA6NMZ2 147 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 NCBP2LA6PVI3 153 aaKnown RBP6.34□□□□□ -1.39
USP48-207ENST00000471752 SERPINE3A8MV23 424 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 CCRL2O00421 344 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 HSD17B6O14756 317 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 IGHG2P01859 326 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 PF4P02776 101 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 MAS1P04201 325 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 ALDOBP05062 364 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 FAM106CPP0CH98 169 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 VSIG8P0DPA2 414 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 DCKP27707 260 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 THBS3P49746 956 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 RPL23AP62750 156 aaKnown RBP6.34□□□□□ -1.39
USP48-207ENST00000471752 ST3GAL4Q11206 333 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 MADCAM1Q13477 382 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 EBI3Q14213 229 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 SYT6Q5T7P8 510 aaPredicted RBP6.34□□□□□ -1.39
USP48-207ENST00000471752 GLIPR1L1Q6UWM5 242 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 C16orf82Q7Z2V1 217 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 Q8N9W7 124 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 OR52L2PQ8NGH6 319 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 OR10X1Q8NGY0 326 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 PARP12Q9H0J9 701 aaKnown RBP6.34□□□□□ -1.39
USP48-207ENST00000471752 NCOR1P1Q9H4R4 102 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 IFT22Q9H7X7 185 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 RHOFQ9HBH0 211 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 TMEM138Q9NPI0 162 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 GFOD1Q9NXC2 390 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 SMPD3Q9NY59 655 aaPredicted RBP6.34□□□□□ -1.39
USP48-207ENST00000471752 DIMT1Q9UNQ2 313 aaKnown RBP6.34□□□□□ -1.39
USP48-207ENST00000471752 PCDHGB5Q9Y5G0 923 aa6.34□□□□□ -1.39
USP48-207ENST00000471752 PLECQ15149 4684 aaKnown RBP6.34□□□□□ -1.39
USP48-207ENST00000471752 TENM2Q9NT68 2774 aa6.34□□□□□ -1.4
USP48-207ENST00000471752 TMEM30CPA0ZSE6 113 aa6.33□□□□□ -1.4
USP48-207ENST00000471752 OOSP1A8MZH6 123 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms