RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SRRQ9GZT4 340 aa7.46□□□□□ -1.21
CD47-204ENST00000471694 RAB33BQ9H082 229 aa7.46□□□□□ -1.21
CD47-204ENST00000471694 TMEM272A0A1B0GTI8 110 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 PPP5D1E7EU14 171 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 OIP5O43482 229 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 CD3DP04234 171 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 HIST1H1DP16402 221 aaKnown RBP7.46□□□□□ -1.22
CD47-204ENST00000471694 SRSF7Q16629 238 aaKnown RBP eCLIP7.46□□□□□ -1.22
CD47-204ENST00000471694 FAM209BQ5JX69 171 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 WDR25Q64LD2 544 aaPredicted RBP7.46□□□□□ -1.22
CD47-204ENST00000471694 C20orf27Q9GZN8 174 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 ANKRD31Q8N7Z5 1873 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 ARRDC5A6NEK1 342 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 FOXS1O43638 330 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 PEBP1P30086 187 aaKnown RBP7.46□□□□□ -1.22
CD47-204ENST00000471694 CDKN2AP42771 156 aaKnown RBP7.46□□□□□ -1.22
CD47-204ENST00000471694 LRRC75BQ2VPJ9 315 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 SLC35E4Q6ICL7 350 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 RPUSD3Q6P087 351 aaKnown RBP7.46□□□□□ -1.22
CD47-204ENST00000471694 VWA1Q6PCB0 445 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 SLC35E3Q7Z769 313 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 LRRTM1Q86UE6 522 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 CNTD2Q9H8S5 307 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 J3QR06 171 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 MVDP53602 400 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 MFAP4P55083 255 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 HCP5Q6MZN7 132 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 ZNF485Q8NCK3 441 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 RXFP4Q8TDU9 374 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 TMED3Q9Y3Q3 217 aa7.46□□□□□ -1.22
CD47-204ENST00000471694 TO15178 435 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 SPINK4O60575 86 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 HLA-DRB3P79483 266 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 SPCS2Q15005 226 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 C3orf36Q3SXR2 165 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 SMUG1Q53HV7 270 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 ZNF826PQ6ZT77 177 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 SVBPQ8N300 66 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 NEUROG3Q9Y4Z2 214 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 TMSB15BA0A087X1C1 80 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 C1QTNF9BB2RNN3 333 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 MGST3O14880 152 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 LILRA1O75019 489 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 C1QTNF9P0C862 333 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 LSAMPQ13449 338 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 PRNTQ86SH4 94 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 OR8G5Q8NG78 346 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 MEGF10Q96KG7 1140 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 ZNF275Q9NSD4 429 aaPredicted RBP7.45□□□□□ -1.22
CD47-204ENST00000471694 NPFFO15130 113 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 SYNGR2O43760 224 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 IGHV3-23P01764 117 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 CPN1P15169 458 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 NQO2P16083 231 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 S100A11P31949 105 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 HERPUD1Q15011 391 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 ZNF561Q8N587 486 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 FAM210BQ96KR6 192 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 SLC25A37Q9NYZ2 338 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 TECRQ9NZ01 308 aaKnown RBP7.45□□□□□ -1.22
CD47-204ENST00000471694 SIGLEC7Q9Y286 467 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 MCM3APO60318 1980 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 SAP30O75446 220 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 OR2A4O95047 310 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 HOXB1P14653 301 aaPredicted RBP7.45□□□□□ -1.22
CD47-204ENST00000471694 USF1P22415 310 aaPredicted RBP7.45□□□□□ -1.22
CD47-204ENST00000471694 NHLH1Q02575 133 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 ZNF841Q6ZN19 808 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 C19orf35Q6ZS72 473 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 PXT1Q8NFP0 134 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 RHOXF1Q8NHV9 184 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 HGDQ93099 445 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 NOL4LQ96MY1 436 aaPredicted RBP7.45□□□□□ -1.22
CD47-204ENST00000471694 OR2A7Q96R45 310 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 CDCA4Q9BXL8 241 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 STARD10Q9Y365 291 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 TRPM6Q9BX84 2022 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 THBDP07204 575 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 RPL35P42766 123 aaKnown RBP7.45□□□□□ -1.22
CD47-204ENST00000471694 PSMB2P49721 201 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 GLDNQ6ZMI3 551 aaPredicted RBP7.45□□□□□ -1.22
CD47-204ENST00000471694 C17orf47Q8NEP4 570 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 SSMEM1Q8WWF3 244 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 DUX3Q96PT4 197 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 TMEM106BQ9NUM4 274 aa7.45□□□□□ -1.22
CD47-204ENST00000471694 A0A0G2JLM5 398 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 ZAR1LA6NP61 321 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 PJVKQ0ZLH3 352 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 DHRS2Q13268 280 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 TIMM23BQ5SRD1 257 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 LYG2Q86SG7 212 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 ZG16BQ96DA0 208 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 RAB40CQ96S21 281 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 SLC6A13Q9NSD5 602 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 RASL12Q9NYN1 266 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 MFSD2BA6NFX1 497 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 E9PQ18 207 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 ISG15P05161 165 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 PRSS2P07478 247 aa7.44□□□□□ -1.22
CD47-204ENST00000471694 OR5AL1P0C617 328 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms