RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 UBALD1Q8TB05 177 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 CCDC107Q8WV48 283 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 MSI2Q96DH6 328 aaKnown RBP8.1□□□□□ -1.11
SF3A1-207ENST00000471342 COX4I2Q96KJ9 171 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 TBX15Q96SF7 602 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 CMSS1Q9BQ75 279 aaKnown RBP8.1□□□□□ -1.11
SF3A1-207ENST00000471342 PIMREGQ9BSJ6 248 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 THAP7Q9BT49 309 aaPredicted RBP8.1□□□□□ -1.11
SF3A1-207ENST00000471342 SSBP3Q9BWW4 388 aaPredicted RBP8.1□□□□□ -1.11
SF3A1-207ENST00000471342 SCPEP1Q9HB40 452 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 C12orf4Q9NQ89 552 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 ACANP16112 2415 aa8.1□□□□□ -1.11
SF3A1-207ENST00000471342 HIVEP1P15822 2718 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 DSCAML1Q8TD84 2053 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 A0A087X0M5 115 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 PPIAL4CA0A0B4J2A2 164 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 IGHV2-70DA0A0C4DH43 119 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 KBTBD11-OT1A0A1B0GTJ5 212 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 A0A1B0GX30 115 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 TMEM30CPA0ZSE6 113 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 ISPDA4D126 451 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 NDUFB3O43676 98 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 TUSC2O75896 110 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 HBZP02008 142 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 PRSS3P35030 304 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 RANBP1P43487 201 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 RFX2P48378 723 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 LCN2P80188 198 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 PRB3Q04118 309 aaPredicted RBP8.09□□□□□ -1.11
SF3A1-207ENST00000471342 MEF2CQ06413 473 aaPredicted RBP8.09□□□□□ -1.11
SF3A1-207ENST00000471342 IL18Q14116 193 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 EDDM3AQ14507 147 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 GNMTQ14749 295 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 TMEM249Q2WGJ8 235 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 RNASE12Q5GAN4 147 aaKnown RBP8.09□□□□□ -1.11
SF3A1-207ENST00000471342 STEAP3Q658P3 488 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 SPNS3Q6ZMD2 512 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 OVCH2Q7RTZ1 564 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 TRAPPC6BQ86SZ2 158 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 LHFPL1Q86WI0 220 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 OR8B3Q8NGG8 313 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 ZNF596Q8TC21 504 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 MRGPRDQ8TDS7 321 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 TIMD4Q96H15 378 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 KIRREL1Q96J84 757 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 OR8B2Q96RD0 313 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 AGMATQ9BSE5 352 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 TMPRSS13Q9BYE2 586 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 TINAGL1Q9GZM7 467 aaPredicted RBP8.09□□□□□ -1.11
SF3A1-207ENST00000471342 UNKLQ9H9P5 680 aaKnown RBP8.09□□□□□ -1.11
SF3A1-207ENST00000471342 TAF9BQ9HBM6 251 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 OR1A1Q9P1Q5 309 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 ZNRD1Q9P1U0 126 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 CLN8Q9UBY8 286 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 INSIG2Q9Y5U4 225 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 LINC00312Q9Y6C7 94 aa8.09□□□□□ -1.11
SF3A1-207ENST00000471342 CSPG4Q6UVK1 2322 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 MEIKINA0A087WXM9 373 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 TRBV6-7A0A0A0MS04 114 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 TRBV23-1A0A0A0MS06 115 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 A0A1W2PQ09 198 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 NKX6-3A6NJ46 265 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 TRDCB7Z8K6 153 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 GPR37O15354 613 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 SLC31A2O15432 143 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 CD3DP04234 171 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 NPY4RP50391 375 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 RPL31P62899 125 aaKnown RBP8.08□□□□□ -1.12
SF3A1-207ENST00000471342 EIF4EBP1Q13541 118 aaPredicted RBP8.08□□□□□ -1.12
SF3A1-207ENST00000471342 RBM39Q14498 530 aaKnown RBP8.08□□□□□ -1.12
SF3A1-207ENST00000471342 KCNJ8Q15842 424 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 FAM189A2Q15884 450 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 KLF17Q5JT82 389 aaPredicted RBP8.08□□□□□ -1.12
SF3A1-207ENST00000471342 AADACL3Q5VUY0 350 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 FAAP20Q6NZ36 180 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 DHRS11Q6UWP2 260 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 PEG10Q86TG7 708 aaKnown RBP8.08□□□□□ -1.12
SF3A1-207ENST00000471342 ZNF554Q86TJ5 538 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 ODF3L1Q8IXM7 274 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 Q8N402 240 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 TMEM229BQ8NBD8 167 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 OR52L2PQ8NGH6 319 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 OR13C8Q8NGS7 320 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 RFESDQ8TAC1 157 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 DMRTB1Q96MA1 342 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 SLC6A7Q99884 636 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 ST6GALNAC5Q9BVH7 336 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 TMUB1Q9BVT8 246 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 ING3Q9NXR8 418 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 TAS2R3Q9NYW6 316 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 CALYQ9NYX4 217 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 ZNF107Q9UII5 783 aaPredicted RBP8.08□□□□□ -1.12
SF3A1-207ENST00000471342 ANXA10Q9UJ72 324 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 ZNF221Q9UK13 617 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 UBE2J1Q9Y385 318 aaPredicted RBP8.08□□□□□ -1.12
SF3A1-207ENST00000471342 CUBNO60494 3623 aa8.08□□□□□ -1.12
SF3A1-207ENST00000471342 LOC105371242A0A075B767 164 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 LY6LH3BQJ8 138 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 H7C1Q1 480 aa8.07□□□□□ -1.12
SF3A1-207ENST00000471342 FABP7O15540 132 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms