RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PIPOXQ9P0Z9 390 aa14.7□□□□□ -0.06
HSPG2-208ENST00000471322 SHPKQ9UHJ6 478 aa14.7□□□□□ -0.06
HSPG2-208ENST00000471322 USF3Q68DE3 2245 aa14.69□□□□□ -0.06
HSPG2-208ENST00000471322 SIRPB1O00241 398 aa14.69□□□□□ -0.06
HSPG2-208ENST00000471322 SFT2D2O95562 160 aa14.69□□□□□ -0.06
HSPG2-208ENST00000471322 ZNF728P0DKX0 622 aa14.69□□□□□ -0.06
HSPG2-208ENST00000471322 KCNJ3P48549 501 aa14.69□□□□□ -0.06
HSPG2-208ENST00000471322 ZNF81P51508 661 aa14.69□□□□□ -0.06
HSPG2-208ENST00000471322 SEC61A1P61619 476 aaKnown RBP14.69□□□□□ -0.06
HSPG2-208ENST00000471322 Q6ZPA2 131 aa14.69□□□□□ -0.06
HSPG2-208ENST00000471322 DIRC2Q96SL1 478 aa14.69□□□□□ -0.06
HSPG2-208ENST00000471322 LAMP3Q9UQV4 416 aa14.69□□□□□ -0.06
HSPG2-208ENST00000471322 DSCAMO60469 2012 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 E7EQL1 145 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 DIRAS3O95661 229 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 GATA4P43694 442 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 GMFBP60983 142 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 HERV-K104P61576 105 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 ZNF497Q6ZNH5 498 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 GAPTQ8N292 157 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 OR4A4PQ8NGN8 299 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 COQ8AQ8NI60 647 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 LRRC29Q8WV35 223 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 ERGIC1Q969X5 290 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 TMEM230Q96A57 120 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 MOB3AQ96BX8 217 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 OR2V2Q96R30 315 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 CCL19Q99731 98 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 IL19Q9UHD0 177 aa14.68□□□□□ -0.06
HSPG2-208ENST00000471322 SPRY3O43610 288 aa14.67□□□□□ -0.06
HSPG2-208ENST00000471322 SOD3P08294 240 aa14.67□□□□□ -0.06
HSPG2-208ENST00000471322 BAMBIQ13145 260 aa14.67□□□□□ -0.06
HSPG2-208ENST00000471322 SLC38A6Q8IZM9 456 aa14.67□□□□□ -0.06
HSPG2-208ENST00000471322 OR5M8Q8NGP6 311 aa14.67□□□□□ -0.06
HSPG2-208ENST00000471322 CASTOR1Q8WTX7 329 aa14.67□□□□□ -0.06
HSPG2-208ENST00000471322 OR14J1Q9UGF5 321 aa14.67□□□□□ -0.06
HSPG2-208ENST00000471322 SLC23A1Q9UHI7 598 aa14.67□□□□□ -0.06
HSPG2-208ENST00000471322 OPN4Q9UHM6 478 aa14.67□□□□□ -0.06
HSPG2-208ENST00000471322 PCDHB10Q9UN67 800 aa14.67□□□□□ -0.06
HSPG2-208ENST00000471322 ARID1AO14497 2285 aa14.67□□□□□ -0.06
HSPG2-208ENST00000471322 WNT9BO14905 357 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 H2BFSP57053 126 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 SRSF4Q08170 494 aaKnown RBP14.66□□□□□ -0.06
HSPG2-208ENST00000471322 C2orf68Q2NKX9 166 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 SGPP2Q8IWX5 399 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 ITPR3Q14573 2671 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 PRRC2AP48634 2157 aaKnown RBP14.66□□□□□ -0.06
HSPG2-208ENST00000471322 SRRM5B3KS81 715 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 ADH4P08319 380 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 SCTP09683 121 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 PI3P19957 117 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 HLA-DRB3P79483 266 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 ABCA11PQ4W5N1 156 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 IGSF11Q5DX21 431 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 SLC35E4Q6ICL7 350 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 TMPRSS13Q9BYE2 586 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 PAIP2BQ9ULR5 123 aaKnown RBP14.66□□□□□ -0.06
HSPG2-208ENST00000471322 KCNIP3Q9Y2W7 256 aa14.66□□□□□ -0.06
HSPG2-208ENST00000471322 RAI1Q7Z5J4 1906 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-208ENST00000471322 TMEM30CPA0ZSE6 113 aa14.65□□□□□ -0.06
HSPG2-208ENST00000471322 SIX6O95475 246 aa14.65□□□□□ -0.06
HSPG2-208ENST00000471322 PPYP01298 95 aa14.65□□□□□ -0.06
HSPG2-208ENST00000471322 OR4A8P0C604 315 aa14.65□□□□□ -0.06
HSPG2-208ENST00000471322 AADACP22760 399 aa14.65□□□□□ -0.06
HSPG2-208ENST00000471322 TNFAIP6P98066 277 aaPredicted RBP14.65□□□□□ -0.06
HSPG2-208ENST00000471322 FGL1Q08830 312 aa14.65□□□□□ -0.06
HSPG2-208ENST00000471322 ADIPOQQ15848 244 aa14.65□□□□□ -0.06
HSPG2-208ENST00000471322 C20orf204Q6ZNR8 217 aa14.65□□□□□ -0.06
HSPG2-208ENST00000471322 CCDC71LQ8N9Z2 235 aa14.65□□□□□ -0.06
HSPG2-208ENST00000471322 OR5T2Q8NGG2 359 aa14.65□□□□□ -0.06
HSPG2-208ENST00000471322 FXYD6Q9H0Q3 95 aa14.65□□□□□ -0.06
HSPG2-208ENST00000471322 TRAPPC2LQ9UL33 140 aa14.65□□□□□ -0.06
HSPG2-208ENST00000471322 WIPI2Q9Y4P8 454 aa14.65□□□□□ -0.06
HSPG2-208ENST00000471322 TEX13DA0A0J9YY54 714 aaPredicted RBP14.64□□□□□ -0.07
HSPG2-208ENST00000471322 RFPL4AA6NLU0 287 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 DBX1A6NMT0 343 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 C3orf80F5H4A9 247 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 RFPL4AL1F8VTS6 287 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 BET1O15155 118 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 IFNA2P01563 188 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 IGHV1-46P01743 117 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 SUPT4H1P63272 117 aaKnown RBP14.64□□□□□ -0.07
HSPG2-208ENST00000471322 LY6G6FQ5SQ64 297 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 KCTD9Q7L273 389 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 MOGAT3Q86VF5 341 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 FAM185AQ8N0U4 392 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 C9orf62Q8N4C0 152 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 PPP1R35Q8TAP8 253 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 PLPPR1Q8TBJ4 325 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 ITLN1Q8WWA0 313 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 TOMM40LQ969M1 308 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 VRK1Q99986 396 aaPredicted RBP14.64□□□□□ -0.07
HSPG2-208ENST00000471322 CABLES2Q9BTV7 478 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 RSRP1Q9BUV0 290 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 GON7Q9BXV9 100 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 RAB18Q9NP72 206 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 HSPB11Q9Y547 144 aa14.64□□□□□ -0.07
HSPG2-208ENST00000471322 CRYM-AS1A6NIL9 109 aa14.63□□□□□ -0.07
HSPG2-208ENST00000471322 NPIPB11E5RHQ5 1161 aa14.63□□□□□ -0.07
HSPG2-208ENST00000471322 TUSC2O75896 110 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms