RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 BBC3Q96PG8 261 aaPredicted RBP21.7■■□□□ 1.06
U2AF1-208ENST00000471250 PHB2Q99623 299 aa21.7■■□□□ 1.06
U2AF1-208ENST00000471250 CLEC4MQ9H2X3 399 aaPredicted RBP21.7■■□□□ 1.06
U2AF1-208ENST00000471250 DCAF16Q9NXF7 216 aa21.7■■□□□ 1.06
U2AF1-208ENST00000471250 FAM172BPA6NC97 362 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 SMLR1H3BR10 107 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 GOSR2O14653 212 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 SLC22A5O76082 557 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 OR2A4O95047 310 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 RPS2P15880 293 aaKnown RBP21.69■■□□□ 1.06
U2AF1-208ENST00000471250 MUC1P15941 1255 aaPredicted RBP21.69■■□□□ 1.06
U2AF1-208ENST00000471250 CASTOR1Q8WTX7 329 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 SDSLQ96GA7 329 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 OR2A7Q96R45 310 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 RSRP1Q9BUV0 290 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 TAF9BQ9HBM6 251 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 KCNIP1Q9NZI2 227 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 PIPOXQ9P0Z9 390 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 USP24Q9UPU5 2620 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 OOEPA6NGQ2 149 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 MGST3O14880 152 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 GIPP09681 153 aaPredicted RBP21.69■■□□□ 1.06
U2AF1-208ENST00000471250 GZMKP49863 264 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 CLEC18BQ6UXF7 455 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 OR10J5Q8NHC4 309 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 MAB21L2Q9Y586 359 aa21.69■■□□□ 1.06
U2AF1-208ENST00000471250 CACNA1BQ00975 2339 aa21.68■■□□□ 1.06
U2AF1-208ENST00000471250 K7N7A8 449 aa21.68■■□□□ 1.06
U2AF1-208ENST00000471250 GLIPR1P48060 266 aa21.68■■□□□ 1.06
U2AF1-208ENST00000471250 SNRPD2P62316 118 aaKnown RBP21.68■■□□□ 1.06
U2AF1-208ENST00000471250 LPCAT3Q6P1A2 487 aa21.68■■□□□ 1.06
U2AF1-208ENST00000471250 H1FOOQ8IZA3 346 aaPredicted RBP21.68■■□□□ 1.06
U2AF1-208ENST00000471250 C1orf87Q8N0U7 546 aa21.68■■□□□ 1.06
U2AF1-208ENST00000471250 ZNF561Q8N587 486 aa21.68■■□□□ 1.06
U2AF1-208ENST00000471250 A0A0B4J2A0 478 aa21.67■■□□□ 1.06
U2AF1-208ENST00000471250 CRYM-AS1A6NIL9 109 aa21.67■■□□□ 1.06
U2AF1-208ENST00000471250 ZNF486Q96H40 463 aaPredicted RBP21.67■■□□□ 1.06
U2AF1-208ENST00000471250 CHIAQ9BZP6 476 aa21.67■■□□□ 1.06
U2AF1-208ENST00000471250 SHPKQ9UHJ6 478 aa21.67■■□□□ 1.06
U2AF1-208ENST00000471250 TMEM178BH3BS89 294 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 LGALS8O00214 317 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 SIX6O95475 246 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 HLA-GP17693 338 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 H2BFSP57053 126 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 PIGPP57054 158 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 SLC9A3R2Q15599 337 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 ABCA11PQ4W5N1 156 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 C6orf183Q5T699 404 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 ZNRF1Q8ND25 227 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 DEFB108BQ8NET1 73 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 IL1F10Q8WWZ1 152 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 LURAP1Q96LR2 239 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 TMEM106BQ9NUM4 274 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 TANC2Q9HCD6 1990 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 ARFGEF3Q5TH69 2177 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 PRB1P04280 392 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 ERP29P30040 261 aaKnown RBP21.66■■□□□ 1.06
U2AF1-208ENST00000471250 RAP2BP61225 183 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 LIN54Q6MZP7 749 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 C11orf88Q6PI97 169 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 ZNF788Q6ZQV5 615 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 SGPP2Q8IWX5 399 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 OR5D13Q8NGL4 314 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 GAFA1Q96PS6 74 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 RANBP3Q9H6Z4 567 aaPredicted RBP21.66■■□□□ 1.06
U2AF1-208ENST00000471250 ZNF665Q9H7R5 613 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 OR1A1Q9P1Q5 309 aa21.66■■□□□ 1.06
U2AF1-208ENST00000471250 DSCAMO60469 2012 aa21.65■■□□□ 1.06
U2AF1-208ENST00000471250 DBX1A6NMT0 343 aa21.65■■□□□ 1.06
U2AF1-208ENST00000471250 C12orf77C9JDV5 145 aa21.65■■□□□ 1.06
U2AF1-208ENST00000471250 C19orf84I3L1E1 186 aa21.65■■□□□ 1.06
U2AF1-208ENST00000471250 PPOXP50336 477 aa21.65■■□□□ 1.06
U2AF1-208ENST00000471250 LY6G6FQ5SQ64 297 aa21.65■■□□□ 1.06
U2AF1-208ENST00000471250 DCAF12L2Q5VW00 463 aa21.65■■□□□ 1.06
U2AF1-208ENST00000471250 TRAT1Q6PIZ9 186 aa21.65■■□□□ 1.06
U2AF1-208ENST00000471250 PRR18Q8N4B5 295 aa21.65■■□□□ 1.06
U2AF1-208ENST00000471250 TPRX1Q8N7U7 411 aa21.65■■□□□ 1.06
U2AF1-208ENST00000471250 ASB13Q8WXK3 278 aa21.65■■□□□ 1.06
U2AF1-208ENST00000471250 NCOR1P1Q9H4R4 102 aa21.65■■□□□ 1.06
U2AF1-208ENST00000471250 OR2W1Q9Y3N9 320 aa21.65■■□□□ 1.06
U2AF1-208ENST00000471250 RAI1Q7Z5J4 1906 aaPredicted RBP21.64■■□□□ 1.06
U2AF1-208ENST00000471250 ANKHD1Q8IWZ3 2542 aaKnown RBP21.64■■□□□ 1.06
U2AF1-208ENST00000471250 TRAV38-1A0A0B4J264 116 aa21.64■■□□□ 1.05
U2AF1-208ENST00000471250 IGKV1D-13A0A0B4J2D9 117 aa21.64■■□□□ 1.05
U2AF1-208ENST00000471250 GYPAP02724 150 aa21.64■■□□□ 1.05
U2AF1-208ENST00000471250 IGKV1-13P0DP09 117 aa21.64■■□□□ 1.05
U2AF1-208ENST00000471250 EDDM3AQ14507 147 aa21.64■■□□□ 1.05
U2AF1-208ENST00000471250 OR5M8Q8NGP6 311 aa21.64■■□□□ 1.05
U2AF1-208ENST00000471250 OR13A1Q8NGR1 328 aa21.64■■□□□ 1.05
U2AF1-208ENST00000471250 COQ8AQ8NI60 647 aa21.64■■□□□ 1.05
U2AF1-208ENST00000471250 MRGPRDQ8TDS7 321 aa21.64■■□□□ 1.05
U2AF1-208ENST00000471250 HYLS1Q96M11 299 aa21.64■■□□□ 1.05
U2AF1-208ENST00000471250 SLC2A9Q9NRM0 540 aa21.64■■□□□ 1.05
U2AF1-208ENST00000471250 ROS1P08922 2347 aa21.64■■□□□ 1.05
U2AF1-208ENST00000471250 TEX13DA0A0J9YY54 714 aaPredicted RBP21.63■■□□□ 1.05
U2AF1-208ENST00000471250 IFNA2P01563 188 aa21.63■■□□□ 1.05
U2AF1-208ENST00000471250 HEXAP06865 529 aa21.63■■□□□ 1.05
U2AF1-208ENST00000471250 IGFBP2P18065 325 aa21.63■■□□□ 1.05
U2AF1-208ENST00000471250 GNRHRP30968 328 aa21.63■■□□□ 1.05
U2AF1-208ENST00000471250 KCTD9Q7L273 389 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms