RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 HLA-DRB5Q30154 266 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 PLA1AQ53H76 456 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 SIGIRRQ6IA17 410 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 RAB12Q6IQ22 244 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 CCBE1Q6UXH8 406 aaPredicted RBP11.4□□□□□ -0.58
TOP3B-215ENST00000470338 SLC16A12Q6ZSM3 486 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 GAPTQ8N292 157 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 OR9G1Q8NH87 305 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 CREB3L1Q96BA8 519 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 GFI1Q99684 422 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 CST11Q9H112 138 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 ABCB10Q9NRK6 738 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 FBLN5Q9UBX5 448 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 TCF19Q9Y242 345 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 RRP15Q9Y3B9 282 aaKnown RBP11.4□□□□□ -0.58
TOP3B-215ENST00000470338 LEUTXA8MZ59 168 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 LY6LH3BQJ8 138 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 C15orf65H3BRN8 121 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 BUB1B-PAK6H3BSN5 160 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 H3BUI4 141 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 TOR1AO14656 332 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 ORC5O43913 435 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 CHST1O43916 411 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 VSIG8P0DPA2 414 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 JUNBP17275 347 aaPredicted RBP11.39□□□□□ -0.59
TOP3B-215ENST00000470338 NFYBP25208 207 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 HTR2CP28335 458 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 QRFPP83859 136 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 SSX1Q16384 188 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 RFESDQ8TAC1 157 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 NEK7Q8TDX7 302 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 FAM46BQ96A09 425 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 PITPNC1Q9UKF7 332 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 LRRC42Q9Y546 428 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 PEX16Q9Y5Y5 336 aa11.39□□□□□ -0.59
TOP3B-215ENST00000470338 J3QR06 171 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 CA11O75493 328 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 MPIG6BO95866 241 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 SSTR5P35346 364 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 CEACAM3P40198 252 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 KIR2DS4P43632 304 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 KRTAP10-3P60369 221 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 RPS27AP62979 156 aaKnown RBP11.38□□□□□ -0.59
TOP3B-215ENST00000470338 UBE2UQ5VVX9 321 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 OR10K2Q6IF99 312 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 CD200R1LQ6Q8B3 271 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 SPARTQ8N0X7 666 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 SVOPQ8N4V2 548 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 OR52M1Q8NGK5 317 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 OR6M1Q8NGM8 313 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 KCNG3Q8TAE7 436 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 CCDC107Q8WV48 283 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 CITED1Q99966 193 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 MMP28Q9H239 520 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 RANBP3Q9H6Z4 567 aaPredicted RBP11.38□□□□□ -0.59
TOP3B-215ENST00000470338 NDUFB11Q9NX14 153 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 ETAA1Q9NY74 926 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 PSG11Q9UQ72 335 aa11.38□□□□□ -0.59
TOP3B-215ENST00000470338 TMEM14DPA8MWL7 114 aa11.37□□□□□ -0.59
TOP3B-215ENST00000470338 OOSP1A8MZH6 123 aa11.37□□□□□ -0.59
TOP3B-215ENST00000470338 AIPO00170 330 aa11.37□□□□□ -0.59
TOP3B-215ENST00000470338 SLC17A2O00624 439 aa11.37□□□□□ -0.59
TOP3B-215ENST00000470338 PDCD6O75340 191 aa11.37□□□□□ -0.59
TOP3B-215ENST00000470338 BPNT1O95861 308 aa11.37□□□□□ -0.59
TOP3B-215ENST00000470338 CALRP27797 417 aaKnown RBP11.37□□□□□ -0.59
TOP3B-215ENST00000470338 SRSF4Q08170 494 aaKnown RBP11.37□□□□□ -0.59
TOP3B-215ENST00000470338 UNC119Q13432 240 aa11.37□□□□□ -0.59
TOP3B-215ENST00000470338 TPTE2P1Q5T6R2 138 aa11.37□□□□□ -0.59
TOP3B-215ENST00000470338 SYT6Q5T7P8 510 aaPredicted RBP11.37□□□□□ -0.59
TOP3B-215ENST00000470338 LEAP2Q969E1 77 aa11.37□□□□□ -0.59
TOP3B-215ENST00000470338 ARL11Q969Q4 196 aa11.37□□□□□ -0.59
TOP3B-215ENST00000470338 TM2D1Q9BX74 207 aa11.37□□□□□ -0.59
TOP3B-215ENST00000470338 TMEM59Q9BXS4 323 aa11.37□□□□□ -0.59
TOP3B-215ENST00000470338 ZNF696Q9H7X3 374 aa11.37□□□□□ -0.59
TOP3B-215ENST00000470338 AK6Q9Y3D8 172 aaKnown RBP11.37□□□□□ -0.59
TOP3B-215ENST00000470338 TRDV1A0A1B0GX56 115 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 UBE2QL1A1L167 161 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 F2RL2O00254 374 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 GALP22466 123 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 CHATP28329 748 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 BRS3P32247 399 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 LOXL3P58215 753 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 LTC4SQ16873 150 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 PRR31Q5SQ13 230 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 OR2W3Q7Z3T1 314 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 TMEM219Q86XT9 240 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 DTX3Q8N9I9 347 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 OR4C13Q8NGP0 309 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 CYYR1Q96J86 154 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 NPFFR1Q9GZQ6 430 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 KCNK15Q9H427 330 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 TRAPPC2LQ9UL33 140 aa11.36□□□□□ -0.59
TOP3B-215ENST00000470338 AMMECR1Q9Y4X0 333 aaPredicted RBP11.36□□□□□ -0.59
TOP3B-215ENST00000470338 TRAV1-2A0A0B4J238 106 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 C12orf77C9JDV5 145 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 CCRL2O00421 344 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 IGHV3-7P01780 117 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 ARSBP15848 533 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 PSMD7P51665 324 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 ARHGDIBP52566 201 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms