RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ONECUT2O95948 504 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 PNMTP11086 282 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 ERGP11308 486 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 SLC25A6P12236 298 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 F3P13726 295 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 CRISP2P16562 243 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 AADACP22760 399 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 S100GP29377 79 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 GJA4P35212 333 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 COMPP49747 757 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 GPM6AP51674 278 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 PIGPP57054 158 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 RAC3P60763 192 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 RPL15P61313 204 aaKnown RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 RHOBP62745 196 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 SEC11AP67812 179 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 B4GALNT1Q00973 533 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 EWSR1Q01844 656 aaKnown RBP eCLIP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 CD226Q15762 336 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 ADIRFQ15847 76 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 TMEM249Q2WGJ8 235 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 HLA-BQ31612 363 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 SLC22A6Q4U2R8 563 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 SPIN3Q5JUX0 258 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 LINC01590Q5TEZ4 76 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 WDR25Q64LD2 544 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 SLC48A1Q6P1K1 146 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 C17orf78Q8N4C9 275 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 DEFB125Q8N687 156 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF709Q8N972 641 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 CDRT4Q8N9R6 151 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 TSTD1Q8NFU3 115 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 OR11H1Q8NG94 326 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 OR10P1Q8NGE3 313 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 OR6K6Q8NGW6 343 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 OR11L1Q8NGX0 322 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 OR11H2Q8NH07 326 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 OTOSQ8NHW6 89 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF596Q8TC21 504 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 SCGB1C1Q8TD33 95 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 HOXB13Q92826 284 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 ERGIC1Q969X5 290 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 BORCS7Q96B45 105 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 SLC25A44Q96H78 314 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 SFRP2Q96HF1 295 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 LINC00615Q96LM1 132 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 Q96M85 177 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 C8orf49Q96NF6 230 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 AP1S3Q96PC3 154 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 TNFRSF13CQ96RJ3 184 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 ATP5SQ99766 215 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 SMIM7Q9BQ49 75 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 TMEM204Q9BSN7 226 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 LMF2Q9BU23 707 aaKnown RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 MEGF9Q9H1U4 602 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 HEYLQ9NQ87 328 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 MBNL1Q9NR56 388 aaKnown RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 TMEM38BQ9NVV0 291 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 FAM206AQ9NX38 181 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 CLEC4EQ9ULY5 219 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 RNF24Q9Y225 148 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 MRPS2Q9Y399 296 aaKnown RBP4.2□□□□□ -1.74
SF3B1-207ENST00000468925 RHBDD3Q9Y3P4 386 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 TIMM9Q9Y5J7 89 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 NUP210LQ5VU65 1888 aa4.2□□□□□ -1.74
SF3B1-207ENST00000468925 TRAV9-2A0A087WT02 112 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 TRAV34A0A0B4J273 112 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 A6NDN8 102 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 AQP7P3A6NL99 342 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 TMEM14DPA8MWL7 114 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 P2RY10O00398 339 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 SLC17A3O00476 420 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 DEGS1O15121 323 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF207O43670 478 aaKnown RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 PDE6DO43924 150 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 S1PR2O95136 353 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 NUDT14O95848 222 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 CD160O95971 181 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 KLKB1P03952 638 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 GPX1P07203 203 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 FTH1P19P0C7X4 201 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 HOXB2P14652 356 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 HIST1H1DP16402 221 aaKnown RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 KLK2P20151 261 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 PTNP21246 168 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 HNRNPA2B1P22626 353 aaKnown RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 TUBG1P23258 451 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 NTSR1P30989 418 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 VIPR2P41587 438 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 SSR2P43308 183 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 CYB561P49447 251 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF133P52736 654 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 CLDN15P56746 228 aa4.19□□□□□ -1.74
SF3B1-207ENST00000468925 RPS4XP62701 263 aaKnown RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 RPL23P62829 140 aaKnown RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 MEF2BQ02080 365 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 ZFP36L1Q07352 338 aaKnown RBP4.19□□□□□ -1.74
SF3B1-207ENST00000468925 P2RY6Q15077 328 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms