RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 OR52W1Q6IF63 320 aa9□□□□□ -0.97
COL4A6-205ENST00000468338 RTN4RL2Q86UN3 420 aa9□□□□□ -0.97
COL4A6-205ENST00000468338 NKAIN3Q8N8D7 197 aa9□□□□□ -0.97
COL4A6-205ENST00000468338 OR4D6Q8NGJ1 314 aa9□□□□□ -0.97
COL4A6-205ENST00000468338 OR4P4Q8NGL7 312 aa9□□□□□ -0.97
COL4A6-205ENST00000468338 SGMS2Q8NHU3 365 aa9□□□□□ -0.97
COL4A6-205ENST00000468338 FOXRED1Q96CU9 486 aaPredicted RBP9□□□□□ -0.97
COL4A6-205ENST00000468338 UQCC2Q9BRT2 126 aa9□□□□□ -0.97
COL4A6-205ENST00000468338 BARHL1Q9BZE3 327 aa9□□□□□ -0.97
COL4A6-205ENST00000468338 PCDHB16Q9NRJ7 776 aa9□□□□□ -0.97
COL4A6-205ENST00000468338 RCC2Q9P258 522 aaKnown RBP9□□□□□ -0.97
COL4A6-205ENST00000468338 MGAM2Q2M2H8 2515 aa9□□□□□ -0.97
COL4A6-205ENST00000468338 MAS1P04201 325 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 UCHL1P09936 223 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 SERPINA2P20848 420 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 MLLT11Q13015 90 aaPredicted RBP8.99□□□□□ -0.97
COL4A6-205ENST00000468338 MED22Q15528 200 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 RBM48Q5RL73 367 aaKnown RBP8.99□□□□□ -0.97
COL4A6-205ENST00000468338 FAM27D1Q5T7N8 215 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 PRAMEF5Q5TYX0 476 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 DHRS7BQ6IAN0 325 aaPredicted RBP8.99□□□□□ -0.97
COL4A6-205ENST00000468338 SLC35E4Q6ICL7 350 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 GLIPR1L1Q6UWM5 242 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 BAIAP2L2Q6UXY1 529 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 TRAPPC6BQ86SZ2 158 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 LRRTM1Q86UE6 522 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 GAPTQ8N292 157 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 JAGN1Q8N5M9 183 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 ZNF565Q8N9K5 539 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 SUMF2Q8NBJ7 301 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 OR13A1Q8NGR1 328 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 PLPPR1Q8TBJ4 325 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 PHYHIPQ92561 330 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 MUL1Q969V5 352 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 KIRREL1Q96J84 757 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 S100A13Q99584 98 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 DPCDQ9BVM2 203 aaPredicted RBP8.99□□□□□ -0.97
COL4A6-205ENST00000468338 GHRLQ9UBU3 117 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 KIF25Q9UIL4 384 aa8.99□□□□□ -0.97
COL4A6-205ENST00000468338 MRPS28Q9Y2Q9 187 aaKnown RBP8.99□□□□□ -0.97
COL4A6-205ENST00000468338 NBEAL1Q6ZS30 2694 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 MEIKINA0A087WXM9 373 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 FAM90A10PA6NDY2 464 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 FAM90A18PA6NE21 464 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 FAM90A16PA6NEW6 464 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 FAM90A20PA6NIJ5 464 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 FAM90A7PA6NKC0 464 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 FAM90A22PA8MWA6 464 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 FAM90A12PA8MX19 464 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 FAM90A5PA8MXJ8 464 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 FAM90A23PA8MXZ1 464 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 OR7C1O76099 320 aaPredicted RBP8.98□□□□□ -0.97
COL4A6-205ENST00000468338 IL1AP01583 271 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 FAM90A15PP0C7V4 464 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 FAM90A13PP0C7W8 464 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 FAM90A14PP0C7W9 464 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 FAM90A24PP0C7X0 464 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 VHLP40337 213 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 KIR2DS4P43632 304 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 KIR3DS1Q14943 382 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 TBCEQ15813 527 aaPredicted RBP8.98□□□□□ -0.97
COL4A6-205ENST00000468338 SSX2Q16385 188 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 PRR31Q5SQ13 230 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 C1orf100Q5SVJ3 147 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 UTF1Q5T230 341 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 LIPKQ5VXJ0 399 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 TMEM91Q6ZNR0 172 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 ABHD12Q8N2K0 398 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 TMEM104Q8NE00 496 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 OR10A7Q8NGE5 316 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 UFD1Q92890 307 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 TMED9Q9BVK6 235 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 ZNF286AQ9HBT8 521 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 SPACA1Q9HBV2 294 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 RAB18Q9NP72 206 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 TCF19Q9Y242 345 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 RNF114Q9Y508 228 aa8.98□□□□□ -0.97
COL4A6-205ENST00000468338 A6NDX4 124 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 LY6LH3BQJ8 138 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 HSPB6O14558 160 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 DENRO43583 198 aaKnown RBP8.97□□□□□ -0.97
COL4A6-205ENST00000468338 CHST1O43916 411 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 GLAP06280 429 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 SRMP19623 302 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 GZMHP20718 246 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 HTR1DP28221 377 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 KRTAP10-3P60369 221 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 DYNC1I2Q13409 638 aaKnown RBP8.97□□□□□ -0.97
COL4A6-205ENST00000468338 TRAM1Q15629 374 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 AWAT2Q6E213 333 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 SIGIRRQ6IA17 410 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 CCBE1Q6UXH8 406 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-205ENST00000468338 CEACAM19Q7Z692 300 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 ZNF596Q8TC21 504 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 CNBD2Q96M20 576 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 MGLLQ99685 303 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 CITED1Q99966 193 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 RANBP3Q9H6Z4 567 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-205ENST00000468338 ZNF696Q9H7X3 374 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 ING3Q9NXR8 418 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms