RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 C10orf67Q8IYJ2 551 aa19.34■□□□□ 0.69
PTCH1-210ENST00000468211 CCDC107Q8WV48 283 aa19.34■□□□□ 0.69
PTCH1-210ENST00000468211 ZNF281Q9Y2X9 895 aa19.34■□□□□ 0.69
PTCH1-210ENST00000468211 TMEM30CPA0ZSE6 113 aa19.33■□□□□ 0.68
PTCH1-210ENST00000468211 HSD17B6O14756 317 aa19.33■□□□□ 0.68
PTCH1-210ENST00000468211 FGF16O43320 207 aa19.33■□□□□ 0.68
PTCH1-210ENST00000468211 IGFBP3P17936 291 aaPredicted RBP19.33■□□□□ 0.68
PTCH1-210ENST00000468211 RPL23AP62750 156 aaKnown RBP19.33■□□□□ 0.68
PTCH1-210ENST00000468211 PPP3R1P63098 170 aa19.33■□□□□ 0.68
PTCH1-210ENST00000468211 ZNF816Q0VGE8 651 aaPredicted RBP19.33■□□□□ 0.68
PTCH1-210ENST00000468211 TMPRSS11AQ6ZMR5 421 aa19.33■□□□□ 0.68
PTCH1-210ENST00000468211 SMIM19Q96E16 107 aa19.33■□□□□ 0.68
PTCH1-210ENST00000468211 RBMXL1Q96E39 390 aaKnown RBP19.33■□□□□ 0.68
PTCH1-210ENST00000468211 BABAM2Q9NXR7 383 aa19.33■□□□□ 0.68
PTCH1-210ENST00000468211 SMPD3Q9NY59 655 aaPredicted RBP19.33■□□□□ 0.68
PTCH1-210ENST00000468211 TRAV8-7A0A075B6U6 113 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 IGHV1-3A0A0C4DH29 117 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 TRBV5-5A0A0J9YX44 114 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 SERPINE3A8MV23 424 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 CSTBP04080 98 aaKnown RBP19.32■□□□□ 0.68
PTCH1-210ENST00000468211 GZMHP20718 246 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 RPS11P62280 158 aaKnown RBP eCLIP19.32■□□□□ 0.68
PTCH1-210ENST00000468211 EBI3Q14213 229 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 SLC22A6Q4U2R8 563 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 ATAD3CQ5T2N8 411 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 OR2W3Q7Z3T1 314 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 ZFP41Q8N8Y5 198 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 ZNF555Q8NEP9 628 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 CHPT1Q8WUD6 406 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 GHSRQ92847 366 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 ARL11Q969Q4 196 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 CYYR1Q96J86 154 aa19.32■□□□□ 0.68
PTCH1-210ENST00000468211 EAF1Q96JC9 268 aaPredicted RBP19.32■□□□□ 0.68
PTCH1-210ENST00000468211 ZNF184Q99676 751 aaPredicted RBP19.32■□□□□ 0.68
PTCH1-210ENST00000468211 IGHV3-43A0A0B4J1X8 118 aa19.31■□□□□ 0.68
PTCH1-210ENST00000468211 CCRL2O00421 344 aa19.31■□□□□ 0.68
PTCH1-210ENST00000468211 BAG2O95816 211 aa19.31■□□□□ 0.68
PTCH1-210ENST00000468211 IGHG2P01859 326 aa19.31■□□□□ 0.68
PTCH1-210ENST00000468211 IGHV3-43DP0DP04 118 aa19.31■□□□□ 0.68
PTCH1-210ENST00000468211 THBS3P49746 956 aa19.31■□□□□ 0.68
PTCH1-210ENST00000468211 C8orf86Q6ZUL3 223 aa19.31■□□□□ 0.68
PTCH1-210ENST00000468211 MOB3BQ86TA1 216 aa19.31■□□□□ 0.68
PTCH1-210ENST00000468211 DIMT1Q9UNQ2 313 aaKnown RBP19.31■□□□□ 0.68
PTCH1-210ENST00000468211 SDCBPO00560 298 aaPredicted RBP19.3■□□□□ 0.68
PTCH1-210ENST00000468211 MT-ND4P03905 459 aa19.3■□□□□ 0.68
PTCH1-210ENST00000468211 GAPDHP04406 335 aaKnown RBP19.3■□□□□ 0.68
PTCH1-210ENST00000468211 EGFEM1PQ0D2K5 195 aa19.3■□□□□ 0.68
PTCH1-210ENST00000468211 RIPK1Q13546 671 aa19.3■□□□□ 0.68
PTCH1-210ENST00000468211 MPV17LQ2QL34 196 aa19.3■□□□□ 0.68
PTCH1-210ENST00000468211 DMKNQ6E0U4 476 aaPredicted RBP19.3■□□□□ 0.68
PTCH1-210ENST00000468211 ZNF497Q6ZNH5 498 aa19.3■□□□□ 0.68
PTCH1-210ENST00000468211 SLC35E3Q7Z769 313 aa19.3■□□□□ 0.68
PTCH1-210ENST00000468211 LINC00596Q86U02 117 aa19.3■□□□□ 0.68
PTCH1-210ENST00000468211 Q8N6K4 173 aa19.3■□□□□ 0.68
PTCH1-210ENST00000468211 ZNF485Q8NCK3 441 aa19.3■□□□□ 0.68
PTCH1-210ENST00000468211 S100A13Q99584 98 aa19.3■□□□□ 0.68
PTCH1-210ENST00000468211 GFOD1Q9NXC2 390 aa19.3■□□□□ 0.68
PTCH1-210ENST00000468211 DNAH9Q9NYC9 4486 aa19.29■□□□□ 0.68
PTCH1-210ENST00000468211 SLC31A2O15432 143 aa19.29■□□□□ 0.68
PTCH1-210ENST00000468211 DUS4LO95620 317 aaKnown RBP19.29■□□□□ 0.68
PTCH1-210ENST00000468211 LINC00311Q8N616 119 aa19.29■□□□□ 0.68
PTCH1-210ENST00000468211 OR52M1Q8NGK5 317 aa19.29■□□□□ 0.68
PTCH1-210ENST00000468211 NEK7Q8TDX7 302 aa19.29■□□□□ 0.68
PTCH1-210ENST00000468211 ST6GALNAC6Q969X2 333 aa19.29■□□□□ 0.68
PTCH1-210ENST00000468211 PGLYRP3Q96LB9 341 aa19.29■□□□□ 0.68
PTCH1-210ENST00000468211 RDH12Q96NR8 316 aa19.29■□□□□ 0.68
PTCH1-210ENST00000468211 EXOSC1Q9Y3B2 195 aaKnown RBP19.29■□□□□ 0.68
PTCH1-210ENST00000468211 A0A1W2PPK0 400 aa19.28■□□□□ 0.68
PTCH1-210ENST00000468211 ZNF736B4DX44 427 aaPredicted RBP19.28■□□□□ 0.68
PTCH1-210ENST00000468211 ORC5O43913 435 aa19.28■□□□□ 0.68
PTCH1-210ENST00000468211 GPX5O75715 221 aa19.28■□□□□ 0.68
PTCH1-210ENST00000468211 GTF2F2P13984 249 aa19.28■□□□□ 0.68
PTCH1-210ENST00000468211 Q499Y3 187 aa19.28■□□□□ 0.68
PTCH1-210ENST00000468211 IZUMO1Q8IYV9 350 aa19.28■□□□□ 0.68
PTCH1-210ENST00000468211 STPG2Q8N412 459 aa19.28■□□□□ 0.68
PTCH1-210ENST00000468211 TMEM104Q8NE00 496 aa19.28■□□□□ 0.68
PTCH1-210ENST00000468211 MUL1Q969V5 352 aa19.28■□□□□ 0.68
PTCH1-210ENST00000468211 PAK1IP1Q9NWT1 392 aaPredicted RBP19.28■□□□□ 0.68
PTCH1-210ENST00000468211 AIPO00170 330 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 MYL12AP19105 171 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 DOC2BQ14184 412 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 LRRC36Q1X8D7 754 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 DEFB121Q5J5C9 76 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 C8orf31Q8N9H6 132 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 Q8N9W7 124 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 KLHL30-AS1Q8NEE0 82 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 OR51D1Q8NGF3 324 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 RTN4IP1Q8WWV3 396 aaPredicted RBP19.27■□□□□ 0.68
PTCH1-210ENST00000468211 TMEM80Q96HE8 168 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 DUX3Q96PT4 197 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 P2RX4Q99571 388 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 PLSCR3Q9NRY6 295 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 ZFP57Q9NU63 452 aa19.27■□□□□ 0.68
PTCH1-210ENST00000468211 RCC2Q9P258 522 aaKnown RBP19.27■□□□□ 0.68
PTCH1-210ENST00000468211 TRBV5-7A0A0A0MS05 114 aa19.26■□□□□ 0.67
PTCH1-210ENST00000468211 IRGMA1A4Y4 181 aa19.26■□□□□ 0.67
PTCH1-210ENST00000468211 NCBP2LA6PVI3 153 aaKnown RBP19.26■□□□□ 0.67
PTCH1-210ENST00000468211 NUDT19A8MXV4 375 aa19.26■□□□□ 0.67
PTCH1-210ENST00000468211 C12orf77C9JDV5 145 aa19.26■□□□□ 0.67
PTCH1-210ENST00000468211 ZNF780AO75290 641 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms