RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 PLEKHG7Q6ZR37 379 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 SLC13A5Q86YT5 568 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-209ENST00000467124 LYPD1Q8N2G4 141 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 C2orf73Q8N5S3 287 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-209ENST00000467124 C1orf64Q8NEQ6 169 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 OR11G2Q8NGC1 345 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 CLDN23Q96B33 292 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 HBEGFQ99075 208 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 CHST5Q9GZS9 411 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 TRIM45Q9H8W5 580 aaPredicted RBP2.23□□□□□ -2.05
VPS13A-209ENST00000467124 U3KQK5 164 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 SHANK1Q9Y566 2161 aa2.23□□□□□ -2.05
VPS13A-209ENST00000467124 IGKV1D-17A0A075B6S4 117 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 DAPL1A0PJW8 107 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 GMNCA6NCL1 334 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 H3BMM0 161 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 H3BQ85 93 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 LIN7AO14910 233 aaPredicted RBP2.22□□□□□ -2.05
VPS13A-209ENST00000467124 IGKV1-17P01599 117 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 PTHLHP12272 177 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 CNTFRP26992 372 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 GABRA3P34903 492 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 GABARAPL2P60520 117 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 BAMBIQ13145 260 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 C1DQ13901 141 aaKnown RBP2.22□□□□□ -2.05
VPS13A-209ENST00000467124 LGALSLQ3ZCW2 172 aaPredicted RBP2.22□□□□□ -2.05
VPS13A-209ENST00000467124 PAGE2Q7Z2X7 111 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 OR8A1Q8NGG7 326 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 OR9I1Q8NGQ6 314 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 SPPL2BQ8TCT7 592 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 UBE2WQ96B02 151 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 RBP7Q96R05 134 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 ZNF426Q9BUY5 554 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 PSMD13Q9UNM6 376 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 TRAPPC1Q9Y5R8 145 aa2.22□□□□□ -2.05
VPS13A-209ENST00000467124 POLR3AO14802 1390 aaPredicted RBP2.22□□□□□ -2.05
VPS13A-209ENST00000467124 B4DEV8 164 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 GOLGA8KD6RF30 607 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 FTCDNL1E5RQL4 147 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 GOLGA8MH3BSY2 632 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 SEC16AO15027 2179 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 POP7O75817 140 aaKnown RBP2.21□□□□□ -2.06
VPS13A-209ENST00000467124 ATRNO75882 1429 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 ARL6IP5O75915 188 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 UGT2B7P16662 529 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 ORM2P19652 201 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 PSMA1P25786 263 aaKnown RBP2.21□□□□□ -2.06
VPS13A-209ENST00000467124 COILP38432 576 aaPredicted RBP2.21□□□□□ -2.06
VPS13A-209ENST00000467124 ACTBP60709 375 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 ACTG1P63261 375 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 FAM3AP98173 230 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 TSPAN31Q12999 210 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 CASP8Q14790 479 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 PTPRKQ15262 1439 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 BCL2A1Q16548 175 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 HLA-DRB5Q30154 266 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 KRTAP25-1Q3LHN0 102 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 SDHAF4Q5VUM1 108 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 EBLN2Q6P2I7 272 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 OR5L1Q8NGL2 311 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 ERMNQ8TAM6 284 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 SUN5Q8TC36 379 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 ZNF721Q8TF20 911 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 YIPF5Q969M3 257 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 APOBEC3DQ96AK3 386 aaPredicted RBP2.21□□□□□ -2.06
VPS13A-209ENST00000467124 HDHD2Q9H0R4 259 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 ALX4Q9H161 411 aaPredicted RBP2.21□□□□□ -2.06
VPS13A-209ENST00000467124 METTL9Q9H1A3 318 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 UBAP1Q9NZ09 502 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 OR5V1Q9UGF6 321 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 OR51B4Q9Y5P0 310 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 R4GN34 69 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 MYO15BQ96JP2 1530 aa2.21□□□□□ -2.06
VPS13A-209ENST00000467124 VGLL3A8MV65 326 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 F5H5T6 163 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 PHYHO14832 338 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 EEF1E1O43324 174 aaKnown RBP2.2□□□□□ -2.06
VPS13A-209ENST00000467124 SYNGR1O43759 233 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 UGT2B11O75310 529 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 GPR75O95800 540 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 IGLV3-19P01714 112 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 GYPCP04921 128 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 CTLA4P16410 223 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 GADD45AP24522 165 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 CDC34P49427 236 aaPredicted RBP2.2□□□□□ -2.06
VPS13A-209ENST00000467124 BLVRAP53004 296 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 APOFQ13790 326 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 TBC1D28Q2M2D7 210 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 SPATA31B1PQ5VZV4 182 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 YIPF7Q8N8F6 280 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 FER1L6-AS1Q8NA97 138 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 DTD1Q8TEA8 209 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 KCTD4Q8WVF5 259 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 PPCDCQ96CD2 204 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 NSRP1Q9H0G5 558 aaKnown RBP2.2□□□□□ -2.06
VPS13A-209ENST00000467124 OR2D2Q9H210 308 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 ASF1BQ9NVP2 202 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 PLEKHJ1Q9NW61 149 aa2.2□□□□□ -2.06
VPS13A-209ENST00000467124 FAM206AQ9NX38 181 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms