RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 ITFG2Q969R8 447 aa3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 TMEM106AQ96A25 262 aa3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 C10orf35Q96D05 121 aa3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 SMIM19Q96E16 107 aa3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 FAM234AQ9H0X4 552 aa3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 KCNK15Q9H427 330 aa3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 HMG20AQ9NP66 347 aa3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 STEAP1Q9UHE8 339 aa3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 DHDHQ9UQ10 334 aa3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 GSTK1Q9Y2Q3 226 aa3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 POLDIP2Q9Y2S7 368 aa3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 EXOSC1Q9Y3B2 195 aaKnown RBP3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 HSPE1-MOB4S4R3N1 261 aa3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 DNAH3Q8TD57 4116 aa3.88□□□□□ -1.79
EXOSC3-204ENST00000465860 WNK1Q9H4A3 2382 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 TRBV5-7A0A0A0MS05 114 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 TRAV39A0A0B4J263 110 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 TRAV24A0A0B4J272 114 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 A0A0G2JK05 382 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 MEIOCA2RUB1 952 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 FAM172BPA6NC97 362 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 EFCAB10A6NFE3 127 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 C17orf98A8MV24 154 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 PTGES3LE9PB15 166 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 H0YJX3 145 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 TRIM77I1YAP6 450 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 M0R1W7 72 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 SLC33A1O00400 549 aaPredicted RBP3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 RRHO14718 337 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 NPFFO15130 113 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 ATP6V1G2O95670 118 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 SERPINA3P01011 423 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 CDK1P06493 297 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 HCKP08631 526 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 RPSAP08865 295 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 CCDC159P0C7I6 412 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 OCM2P0CE71 109 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 CELP19835 753 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 BTF3P20290 206 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 MDKP21741 143 aaPredicted RBP3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 PRKACBP22694 351 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 GABRR1P24046 479 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 VHLP40337 213 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 MAP2K4P45985 399 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 IER3P46695 156 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 COMPP49747 757 aaPredicted RBP3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 UBE2E1P51965 193 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 WNT4P56705 351 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 EDDM3BP56851 147 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 ACTG1P63261 375 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 SLC35A2P78381 396 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 SCN1BQ07699 218 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 AESQ08117 197 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 EDDM3AQ14507 147 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 IRF3Q14653 427 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 GRK1Q15835 563 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 CCDC58Q4VC31 144 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 FAM53AQ6NSI3 398 aaPredicted RBP3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 FIP1L1Q6UN15 594 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 IZUMO2Q6UXV1 221 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 ASCL4Q6XD76 172 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 TMPRSS11AQ6ZMR5 421 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 C1orf122Q6ZSJ8 110 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 C5orf24Q7Z6I8 188 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 RTN4RL2Q86UN3 420 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 SATL1Q86VE3 508 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 SERPINA12Q8IW75 414 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 OR8H2Q8N162 312 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 STX19Q8N4C7 294 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 SETD9Q8NE22 299 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 CCDC54Q8NEL0 328 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 OR5D14Q8NGL3 314 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 MPLKIPQ8TAP9 179 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 PLPPR1Q8TBJ4 325 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 PIFOQ8TCI5 191 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 ZFAND2BQ8WV99 257 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 SPSB1Q96BD6 273 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 RBMXL1Q96E39 390 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 COQ2Q96H96 371 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 SNX22Q96L94 193 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 NR1H4Q96RI1 486 aaPredicted RBP3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 GFI1Q99684 422 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 TM2D2Q9BX73 214 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 COMMD4Q9H0A8 199 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 PPA2Q9H2U2 334 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 Q9H521 79 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 NEK6Q9HC98 313 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 CNOT2Q9NZN8 540 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 ZNRD1Q9P1U0 126 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 NOTCH1P46531 2555 aa3.87□□□□□ -1.79
EXOSC3-204ENST00000465860 PRKDCP78527 4128 aaKnown RBP3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 FAM90A8PA6NJQ4 464 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 ODF3BA8MYP8 253 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 CLDN34H7C241 214 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 HSPB6O14558 160 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 GPX5O75715 221 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 SC5DO75845 299 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 MBPP02686 304 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 MAS1P04201 325 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 FGF2P09038 288 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms