RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 C12orf4Q9NQ89 552 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.35□□□□□ -0.11
CPSF4-209ENST00000465132 TAS2R3Q9NYW6 316 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 KPTNQ9Y664 436 aa14.35□□□□□ -0.11
CPSF4-209ENST00000465132 A0A1B0GW55 424 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 UBE2QL1A1L167 161 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 M0R1W7 72 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 RAB27BO00194 218 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 XRCC3O43542 346 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 TFF1P04155 84 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 DUX4L2P0CJ85 424 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 DUX4L3P0CJ86 424 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 DUX4L4P0CJ87 422 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 DUX4L5P0CJ88 424 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 DUX4L6P0CJ89 424 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 DUX4L7P0CJ90 424 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 SELLP14151 372 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 HIST1H1DP16402 221 aaKnown RBP14.34□□□□□ -0.11
CPSF4-209ENST00000465132 PRTN3P24158 256 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 ARFRP1Q13795 201 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 TMEM30BQ3MIR4 351 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 TMEM69Q5SWH9 247 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 SIGIRRQ6IA17 410 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 DUX4L9Q6RFH8 374 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-209ENST00000465132 SHISA2Q6UWI4 295 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 ZNF497Q6ZNH5 498 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 C6orf201Q7Z4U5 140 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 CORO2AQ92828 525 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 ARHGAP5-AS1Q96IT6 56 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 ZNF714Q96N38 554 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 CMSS1Q9BQ75 279 aaKnown RBP14.34□□□□□ -0.11
CPSF4-209ENST00000465132 FAAP24Q9BTP7 215 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 SLIRPQ9GZT3 109 aaKnown RBP14.34□□□□□ -0.11
CPSF4-209ENST00000465132 DUX4Q9UBX2 424 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 ZNF69Q9UC07 566 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 NUP50Q9UKX7 468 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 TRAPPC2LQ9UL33 140 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 INSIG2Q9Y5U4 225 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 AUP1Q9Y679 476 aa14.34□□□□□ -0.11
CPSF4-209ENST00000465132 ZNF729A6NN14 1252 aaPredicted RBP14.33□□□□□ -0.12
CPSF4-209ENST00000465132 FOXI3A8MTJ6 420 aaPredicted RBP14.33□□□□□ -0.12
CPSF4-209ENST00000465132 KCNAB3O43448 404 aa14.33□□□□□ -0.12
CPSF4-209ENST00000465132 CDNFQ49AH0 187 aa14.33□□□□□ -0.12
CPSF4-209ENST00000465132 KLF17Q5JT82 389 aaPredicted RBP14.33□□□□□ -0.12
CPSF4-209ENST00000465132 RSBN1Q5VWQ0 802 aaPredicted RBP14.33□□□□□ -0.12
CPSF4-209ENST00000465132 OR52W1Q6IF63 320 aa14.33□□□□□ -0.12
CPSF4-209ENST00000465132 SLC25A38Q96DW6 304 aa14.33□□□□□ -0.12
CPSF4-209ENST00000465132 ONECUT1Q9UBC0 465 aa14.33□□□□□ -0.12
CPSF4-209ENST00000465132 MEGF8Q7Z7M0 2845 aa14.33□□□□□ -0.12
CPSF4-209ENST00000465132 TRAV18A0A075B6X5 111 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 A0A0A6YYD4 124 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 DNAJC9-AS1A6NH13 148 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 SPINT2O43291 252 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 ORC5O43913 435 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 HPGDSO60760 199 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 MT-ND4P03905 459 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 ZNF728P0DKX0 622 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 CDK2P24941 298 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 CBX5P45973 191 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 GLIPR1P48060 266 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 GNG2P59768 71 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 HACD4Q5VWC8 232 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 TMEM200BQ69YZ2 307 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 BCL6BQ8N143 479 aaPredicted RBP14.32□□□□□ -0.12
CPSF4-209ENST00000465132 GAPTQ8N292 157 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 OR4M1Q8NGD0 313 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 OR10A7Q8NGE5 316 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 DUX5Q96PT3 197 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 SULT4A1Q9BR01 284 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 NXF2Q9GZY0 626 aaKnown RBP14.32□□□□□ -0.12
CPSF4-209ENST00000465132 METTL8Q9H825 291 aaKnown RBP14.32□□□□□ -0.12
CPSF4-209ENST00000465132 ZMAT3Q9HA38 289 aaKnown RBP14.32□□□□□ -0.12
CPSF4-209ENST00000465132 C19orf12Q9NSK7 152 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 KIF25Q9UIL4 384 aa14.32□□□□□ -0.12
CPSF4-209ENST00000465132 DSCAML1Q8TD84 2053 aa14.31□□□□□ -0.12
CPSF4-209ENST00000465132 TRBV6-6A0A0A6YYG2 114 aa14.31□□□□□ -0.12
CPSF4-209ENST00000465132 C22orf46C9J442 243 aa14.31□□□□□ -0.12
CPSF4-209ENST00000465132 MFNGO00587 321 aa14.31□□□□□ -0.12
CPSF4-209ENST00000465132 TMEM50BP56557 158 aa14.31□□□□□ -0.12
CPSF4-209ENST00000465132 ERVFRD-1P60508 538 aa14.31□□□□□ -0.12
CPSF4-209ENST00000465132 PLAC9Q5JTB6 97 aa14.31□□□□□ -0.12
CPSF4-209ENST00000465132 NCR3LG1Q68D85 454 aa14.31□□□□□ -0.12
CPSF4-209ENST00000465132 BRICD5Q6PL45 260 aa14.31□□□□□ -0.12
CPSF4-209ENST00000465132 PLPPR1Q8TBJ4 325 aa14.31□□□□□ -0.12
CPSF4-209ENST00000465132 COQ2Q96H96 371 aa14.31□□□□□ -0.12
CPSF4-209ENST00000465132 ING3Q9NXR8 418 aa14.31□□□□□ -0.12
CPSF4-209ENST00000465132 TOX4O94842 621 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 GNB3P16520 340 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 ELK1P19419 428 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 DTYMKP23919 212 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 GLP1RP43220 463 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 KIR2DS4P43632 304 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 MRPS10P82664 201 aaKnown RBP14.3□□□□□ -0.12
CPSF4-209ENST00000465132 PAX2Q02962 417 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 PAX8Q06710 450 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 PLA2G7Q13093 441 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 BAMBIQ13145 260 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 KIR2DS1Q14954 304 aa14.3□□□□□ -0.12
CPSF4-209ENST00000465132 SRSF7Q16629 238 aaKnown RBP eCLIP14.3□□□□□ -0.12
CPSF4-209ENST00000465132 LINC00299Q6ZSB3 139 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms