RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 TRUB1Q8WWH5 349 aaKnown RBP13.49□□□□□ -0.25
HMGN1-210ENST00000464078 RTN4IP1Q8WWV3 396 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-210ENST00000464078 SLC7A6OSQ96CW6 309 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-210ENST00000464078 RCHY1Q96PM5 261 aa13.49□□□□□ -0.25
HMGN1-210ENST00000464078 NR1H4Q96RI1 486 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-210ENST00000464078 S1PR3Q99500 378 aa13.49□□□□□ -0.25
HMGN1-210ENST00000464078 RIBC2Q9H4K1 309 aa13.49□□□□□ -0.25
HMGN1-210ENST00000464078 TXNL1O43396 289 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 MOSP00540 346 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 OR5H8P0DN80 308 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 GZMHP20718 246 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 VDAC1P21796 283 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 RUNX1Q01196 453 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 PIGYQ3MUY2 71 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 NHLRC3Q5JS37 347 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 ZNF529Q6P280 563 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 ASCL4Q6XD76 172 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 ACBD7Q8N6N7 88 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 RNFT2Q96EX2 444 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 C4orf36Q96KX1 117 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 HSPB9Q9BQS6 159 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 CHCHD6Q9BRQ6 235 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 DPCDQ9BVM2 203 aaPredicted RBP13.48□□□□□ -0.25
HMGN1-210ENST00000464078 FAM118AQ9NWS6 357 aa13.48□□□□□ -0.25
HMGN1-210ENST00000464078 TMEM212A6NML5 194 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 C15orf65H3BRN8 121 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 GABRPO00591 440 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 OR8U8P0C7N1 319 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 IL3RAP26951 378 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 SOX6P35712 828 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 ZNF137PP52743 207 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 SYS1Q8N2H4 156 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 SUMF2Q8NBJ7 301 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 OR11H1Q8NG94 326 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 TNFAIP8L1Q8WVP5 186 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 UBE2E2Q96LR5 201 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 RASL11BQ9BPW5 248 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 IMPAD1Q9NX62 359 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 DNAH1Q9P2D7 4330 aa13.47□□□□□ -0.25
HMGN1-210ENST00000464078 TRAV39A0A0B4J263 110 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 TMEM30CPA0ZSE6 113 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 J3QLW9 94 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 FCGR1AP12314 374 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 ZNF19P17023 458 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 RSU1Q15404 277 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 ASPHD1Q5U4P2 390 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 MEDAGQ5VYS4 303 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 LPCAT4Q643R3 524 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 SBSPONQ8IVN8 264 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 MRPL48Q96GC5 212 aaKnown RBP13.46□□□□□ -0.25
HMGN1-210ENST00000464078 KCTD7Q96MP8 289 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 GFOD1Q9NXC2 390 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 IL36GQ9NZH8 169 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 AP4S1Q9Y587 144 aa13.46□□□□□ -0.25
HMGN1-210ENST00000464078 CSMD3Q7Z407 3707 aa13.46□□□□□ -0.26
HMGN1-210ENST00000464078 LCE6AA0A183 80 aa13.45□□□□□ -0.26
HMGN1-210ENST00000464078 I3L521 148 aa13.45□□□□□ -0.26
HMGN1-210ENST00000464078 SDCBPO00560 298 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-210ENST00000464078 ORC5O43913 435 aa13.45□□□□□ -0.26
HMGN1-210ENST00000464078 RAB3AP20336 220 aa13.45□□□□□ -0.26
HMGN1-210ENST00000464078 RBM11P57052 281 aaKnown RBP13.45□□□□□ -0.26
HMGN1-210ENST00000464078 SNRPGP62308 76 aaKnown RBP13.45□□□□□ -0.26
HMGN1-210ENST00000464078 MRPL28Q13084 256 aaKnown RBP13.45□□□□□ -0.26
HMGN1-210ENST00000464078 AMIGO2Q86SJ2 522 aa13.45□□□□□ -0.26
HMGN1-210ENST00000464078 LINC00596Q86U02 117 aa13.45□□□□□ -0.26
HMGN1-210ENST00000464078 ZNF429Q86V71 674 aa13.45□□□□□ -0.26
HMGN1-210ENST00000464078 OR10K1Q8NGX5 313 aa13.45□□□□□ -0.26
HMGN1-210ENST00000464078 ARL11Q969Q4 196 aa13.45□□□□□ -0.26
HMGN1-210ENST00000464078 MYCBPQ99417 103 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-210ENST00000464078 LYSTQ99698 3801 aa13.45□□□□□ -0.26
HMGN1-210ENST00000464078 CHCHD3Q9NX63 227 aaKnown RBP13.45□□□□□ -0.26
HMGN1-210ENST00000464078 ZNF581Q9P0T4 197 aa13.45□□□□□ -0.26
HMGN1-210ENST00000464078 OAZ3Q9UMX2 235 aa13.45□□□□□ -0.26
HMGN1-210ENST00000464078 DHDHQ9UQ10 334 aa13.45□□□□□ -0.26
HMGN1-210ENST00000464078 EXOGQ9Y2C4 368 aaKnown RBP13.45□□□□□ -0.26
HMGN1-210ENST00000464078 EPPK1P58107 5090 aaKnown RBP13.44□□□□□ -0.26
HMGN1-210ENST00000464078 ZNF736B4DX44 427 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-210ENST00000464078 LY86O95711 162 aa13.44□□□□□ -0.26
HMGN1-210ENST00000464078 ZNF616Q08AN1 781 aa13.44□□□□□ -0.26
HMGN1-210ENST00000464078 KIAA0141Q14154 515 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-210ENST00000464078 TMEM30BQ3MIR4 351 aa13.44□□□□□ -0.26
HMGN1-210ENST00000464078 FAM27D1Q5T7N8 215 aa13.44□□□□□ -0.26
HMGN1-210ENST00000464078 SLC25A48Q6ZT89 311 aaKnown RBP13.44□□□□□ -0.26
HMGN1-210ENST00000464078 ZNF439Q8NDP4 499 aa13.44□□□□□ -0.26
HMGN1-210ENST00000464078 OR51A2Q8NGJ7 313 aa13.44□□□□□ -0.26
HMGN1-210ENST00000464078 TSEN15Q8WW01 171 aaKnown RBP13.44□□□□□ -0.26
HMGN1-210ENST00000464078 GPER1Q99527 375 aa13.44□□□□□ -0.26
HMGN1-210ENST00000464078 ALG8Q9BVK2 526 aa13.44□□□□□ -0.26
HMGN1-210ENST00000464078 ST3GAL6Q9Y274 331 aa13.44□□□□□ -0.26
HMGN1-210ENST00000464078 SNTNA6NMZ2 147 aa13.43□□□□□ -0.26
HMGN1-210ENST00000464078 MAGEB3O15480 346 aa13.43□□□□□ -0.26
HMGN1-210ENST00000464078 OR7C1O76099 320 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-210ENST00000464078 IGLV1-40P01703 118 aa13.43□□□□□ -0.26
HMGN1-210ENST00000464078 LYL1P12980 280 aa13.43□□□□□ -0.26
HMGN1-210ENST00000464078 PPIFP30405 207 aaKnown RBP13.43□□□□□ -0.26
HMGN1-210ENST00000464078 VHLP40337 213 aa13.43□□□□□ -0.26
HMGN1-210ENST00000464078 F2RL1P55085 397 aa13.43□□□□□ -0.26
HMGN1-210ENST00000464078 GALEQ14376 348 aa13.43□□□□□ -0.26
HMGN1-210ENST00000464078 ZNF491Q8N8L2 437 aa13.43□□□□□ -0.26
HMGN1-210ENST00000464078 OR1N2Q8NGR9 330 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms