RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 DAPP51397 102 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 TP53I3Q53FA7 332 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 AQP12AQ8IXF9 295 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 LINC00311Q8N616 119 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 OR13C3Q8NGS6 347 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 OR2G2Q8NGZ5 317 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 NRBF2Q96F24 287 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 OR4C12Q96R67 309 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 WSB1Q9Y6I7 421 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 CSMD3Q7Z407 3707 aa11.21□□□□□ -0.61
SMC1A-204ENST00000463684 ZNF736B4DX44 427 aaPredicted RBP11.2□□□□□ -0.62
SMC1A-204ENST00000463684 LINC01619G3V211 115 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 SDCBPO00560 298 aaPredicted RBP11.2□□□□□ -0.62
SMC1A-204ENST00000463684 TXNL1O43396 289 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 IGLV1-40P01703 118 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 IFNA6P05013 189 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 OR8U9P0C7N5 309 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 PPIFP30405 207 aaKnown RBP11.2□□□□□ -0.62
SMC1A-204ENST00000463684 PAX5Q02548 391 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 GALEQ14376 348 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 KISS1Q15726 138 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 ACSM6Q6P461 480 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 FAHD1Q6P587 224 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 SGPP2Q8IWX5 399 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 C8orf31Q8N9H6 132 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 OR52M1Q8NGK5 317 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 PLPPR1Q8TBJ4 325 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 NSL1Q96IY1 281 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 SPATA25Q9BR10 227 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 ZCCHC4Q9H5U6 513 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 MED4Q9NPJ6 270 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 FRRS1LQ9P0K9 344 aa11.2□□□□□ -0.62
SMC1A-204ENST00000463684 MAGEA13PA6NCF6 341 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 ZAR1LA6NP61 321 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 G3V318 75 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 SLC2A2P11168 524 aaPredicted RBP11.19□□□□□ -0.62
SMC1A-204ENST00000463684 MYF6P23409 242 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 SLURP1P55000 103 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 IL13RA2Q14627 380 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 C12orf73Q69YU5 71 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 ELP2Q6IA86 826 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 KCTD20Q7Z5Y7 419 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 LYPD6Q86Y78 171 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 OR5D14Q8NGL3 314 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 IL17DQ8TAD2 202 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 ARL11Q969Q4 196 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 EME1Q96AY2 570 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 C19orf73Q9NVV2 129 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 ZNF446Q9NWS9 450 aa11.19□□□□□ -0.62
SMC1A-204ENST00000463684 TRAV41A0A0B4J266 112 aa11.18□□□□□ -0.62
SMC1A-204ENST00000463684 A8MZ25 164 aa11.18□□□□□ -0.62
SMC1A-204ENST00000463684 PITPNAQ00169 270 aa11.18□□□□□ -0.62
SMC1A-204ENST00000463684 MMDQ15546 238 aa11.18□□□□□ -0.62
SMC1A-204ENST00000463684 ZNF691Q5VV52 312 aa11.18□□□□□ -0.62
SMC1A-204ENST00000463684 Q8N1Y9 231 aa11.18□□□□□ -0.62
SMC1A-204ENST00000463684 ARPC1AQ92747 370 aa11.18□□□□□ -0.62
SMC1A-204ENST00000463684 RNF166Q96A37 237 aaPredicted RBP11.18□□□□□ -0.62
SMC1A-204ENST00000463684 ALX4Q9H161 411 aaPredicted RBP11.18□□□□□ -0.62
SMC1A-204ENST00000463684 PARP11Q9NR21 331 aa11.18□□□□□ -0.62
SMC1A-204ENST00000463684 ERGIC3Q9Y282 383 aa11.18□□□□□ -0.62
SMC1A-204ENST00000463684 MRPS28Q9Y2Q9 187 aaKnown RBP11.18□□□□□ -0.62
SMC1A-204ENST00000463684 HYDINQ4G0P3 5121 aa11.18□□□□□ -0.62
SMC1A-204ENST00000463684 SORL1Q92673 2214 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 FAM90A10PA6NDY2 464 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 ATP6V0E1O15342 81 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 SULT1B1O43704 296 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 MITFO75030 526 aaPredicted RBP11.17□□□□□ -0.62
SMC1A-204ENST00000463684 FKBP6O75344 327 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 HTR1AP08908 422 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 EPHA2P29317 976 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 CCR9P51686 369 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 ZNF85Q03923 595 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 TMED1Q13445 227 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 RSU1Q15404 277 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 ZSCAN26Q16670 478 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 Q3ZCU0 254 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 FDX2Q6P4F2 183 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 SPATA24Q86W54 205 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 SERPINA12Q8IW75 414 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 SUMF2Q8NBJ7 301 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 PXT1Q8NFP0 134 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 OR51A4Q8NGJ6 313 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 OR10AC1Q8NH08 325 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 CPNE2Q96FN4 548 aaPredicted RBP11.17□□□□□ -0.62
SMC1A-204ENST00000463684 DPCDQ9BVM2 203 aaPredicted RBP11.17□□□□□ -0.62
SMC1A-204ENST00000463684 ELOVL1Q9BW60 279 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 GFOD1Q9NXC2 390 aa11.17□□□□□ -0.62
SMC1A-204ENST00000463684 IGHV3-43A0A0B4J1X8 118 aa11.16□□□□□ -0.62
SMC1A-204ENST00000463684 TMEM30CPA0ZSE6 113 aa11.16□□□□□ -0.62
SMC1A-204ENST00000463684 C15orf65H3BRN8 121 aa11.16□□□□□ -0.62
SMC1A-204ENST00000463684 MAGEB3O15480 346 aa11.16□□□□□ -0.62
SMC1A-204ENST00000463684 HSPA12AO43301 675 aa11.16□□□□□ -0.62
SMC1A-204ENST00000463684 IGHV3-43DP0DP04 118 aa11.16□□□□□ -0.62
SMC1A-204ENST00000463684 NANOS3P60323 173 aaKnown RBP11.16□□□□□ -0.62
SMC1A-204ENST00000463684 PIGYQ3MUY2 71 aa11.16□□□□□ -0.62
SMC1A-204ENST00000463684 SLC25A48Q6ZT89 311 aaKnown RBP11.16□□□□□ -0.62
SMC1A-204ENST00000463684 UBALD1Q8TB05 177 aa11.16□□□□□ -0.62
SMC1A-204ENST00000463684 CCDC107Q8WV48 283 aa11.16□□□□□ -0.62
SMC1A-204ENST00000463684 RFKQ969G6 155 aa11.16□□□□□ -0.62
SMC1A-204ENST00000463684 RBMXL1Q96E39 390 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms