RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 CNTFRP26992 372 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 PYCR1P32322 319 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 TGFBR2P37173 567 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 SMAGPQ0VAQ4 97 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 FAM104BQ5XKR9 115 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 TMEM215Q68D42 235 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 FAM71E1Q6IPT2 247 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 PRSS54Q6PEW0 395 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 OLIG3Q7RTU3 272 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 VN1R4Q7Z5H5 301 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 DNAAF3Q8N9W5 541 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 ST20-AS1Q8NBB2 130 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 OR11L1Q8NGX0 322 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 OR8S1Q8NH09 359 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 SLC37A2Q8TED4 501 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 CMTM5Q96DZ9 223 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 CDCA4Q9BXL8 241 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 TSGA10Q9BZW7 698 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 UCK1Q9HA47 277 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 ZNF230Q9UIE0 474 aaPredicted RBP2.39□□□□□ -2.03
USH2A-203ENST00000463147 C14orf166Q9Y224 244 aaKnown RBP2.39□□□□□ -2.03
USH2A-203ENST00000463147 S4R3C0 116 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 ARID1AO14497 2285 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 KMT2EQ8IZD2 1858 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 CCDC171Q6TFL3 1326 aa2.39□□□□□ -2.03
USH2A-203ENST00000463147 A8MUU9 505 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 H0Y980 276 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 GOLGA6L19H0YKK7 550 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 M0QZ92 97 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 IGKV3-11P04433 115 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 SCGB1C2P0DMR2 95 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 GTF2F2P13984 249 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 GABRA1P14867 456 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 AKR1C4P17516 323 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 MPIP34949 423 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 ACTR1BP42025 376 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 TGM4P49221 684 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 MP68P56378 58 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 PFN3P60673 137 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 RAB2AP61019 212 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 CTAG1AP78358 180 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 MGAT3Q09327 533 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 SKP2Q13309 424 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 BTN1A1Q13410 526 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 DNAL1Q4LDG9 190 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 MRPL2Q5T653 305 aaKnown RBP2.38□□□□□ -2.03
USH2A-203ENST00000463147 SLC25A34Q6PIV7 304 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 DPPA2Q7Z7J5 298 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 SLC13A5Q86YT5 568 aaPredicted RBP2.38□□□□□ -2.03
USH2A-203ENST00000463147 CPNE9Q8IYJ1 553 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 ZFP82Q8N141 532 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 ZNF709Q8N972 641 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 OR5D18Q8NGL1 313 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 OR9A2Q8NGT5 310 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 SCGB1C1Q8TD33 95 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 TAMM41Q96BW9 452 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 KCTD7Q96MP8 289 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 TMEM208Q9BTX3 173 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 UACAQ9BZF9 1416 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 SLC22A4Q9H015 551 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 ARL6Q9H0F7 186 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 METTL9Q9H1A3 318 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 ZNF586Q9NXT0 402 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 HMGXB4Q9UGU5 601 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 PLA2R1Q13018 1463 aa2.38□□□□□ -2.03
USH2A-203ENST00000463147 SLIT3O75094 1523 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 KIF26AQ9ULI4 1882 aaPredicted RBP2.37□□□□□ -2.03
USH2A-203ENST00000463147 SYNJ1O43426 1573 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 IGKV2D-24A0A075B6R9 120 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 DAPL1A0PJW8 107 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 C21orf140B9A014 251 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 AHSA1O95433 338 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 IGHV1-46P01743 117 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 TYMSP04818 313 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 C8orf88P0DMB2 117 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 ZNF32P17041 273 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 S100A2P29034 98 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 RCVRNP35243 200 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 IFNGR2P38484 337 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 EIF4EBP1Q13541 118 aaPredicted RBP2.37□□□□□ -2.03
USH2A-203ENST00000463147 GOLGA7BQ2TAP0 167 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 COX19Q49B96 90 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 MESTQ5EB52 335 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 LAIR2Q6ISS4 152 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 ZNF880Q6PDB4 577 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 TTC33Q6PID6 262 aaPredicted RBP2.37□□□□□ -2.03
USH2A-203ENST00000463147 FAM131AQ6UXB0 335 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 YIPF7Q8N8F6 280 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 OR52E4Q8NGH9 312 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 HAVCR2Q8TDQ0 301 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 C2orf15Q8WU43 125 aaKnown RBP2.37□□□□□ -2.03
USH2A-203ENST00000463147 PPP1R14BQ96C90 147 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 REEP6Q96HR9 211 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 PEBP4Q96S96 227 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 SHANK2-AS3Q9BTD1 123 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 BATF3Q9NR55 127 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 PYCARDQ9ULZ3 195 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 THADAQ6YHU6 1953 aa2.37□□□□□ -2.03
USH2A-203ENST00000463147 POLA1P09884 1462 aaPredicted RBP2.37□□□□□ -2.03
USH2A-203ENST00000463147 PLB1Q6P1J6 1458 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms