RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 A6NLC8 198 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 SIRPB1O00241 398 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 GLAP06280 429 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 RPS2P15880 293 aaKnown RBP12.25□□□□□ -0.45
HDAC6-213ENST00000462730 RBM39Q14498 530 aaKnown RBP12.25□□□□□ -0.45
HDAC6-213ENST00000462730 ATXN7L3Q14CW9 347 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-213ENST00000462730 SRSF7Q16629 238 aaKnown RBP eCLIP12.25□□□□□ -0.45
HDAC6-213ENST00000462730 IGSF11Q5DX21 431 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 BEX5Q5H9J7 111 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 PRAMEF6Q5VXH4 476 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 POC1AQ8NBT0 407 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 MRPL30Q8TCC3 161 aaKnown RBP12.25□□□□□ -0.45
HDAC6-213ENST00000462730 DECR2Q9NUI1 292 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 A0A0B4J2A0 478 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 FAM74A7A6NL05 159 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 DBX1A6NMT0 343 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 H7C2Y5 167 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 HERV-K104P61576 105 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 SNTB1Q13884 538 aaKnown RBP12.25□□□□□ -0.45
HDAC6-213ENST00000462730 ANKRD55Q3KP44 614 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 FAM74A3Q4VXF1 159 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 PAN3Q58A45 887 aaKnown RBP12.25□□□□□ -0.45
HDAC6-213ENST00000462730 ZNF826PQ6ZT77 177 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 C5orf24Q7Z6I8 188 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 LRP11Q86VZ4 500 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 C11orf53Q8IXP5 236 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 GTF3AQ92664 365 aaKnown RBP12.25□□□□□ -0.45
HDAC6-213ENST00000462730 USB1Q9BQ65 265 aaKnown RBP12.25□□□□□ -0.45
HDAC6-213ENST00000462730 RIMS4Q9H426 269 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-213ENST00000462730 SHPKQ9UHJ6 478 aa12.25□□□□□ -0.45
HDAC6-213ENST00000462730 TRDCB7Z8K6 153 aa12.24□□□□□ -0.45
HDAC6-213ENST00000462730 OR2H2O95918 312 aa12.24□□□□□ -0.45
HDAC6-213ENST00000462730 AADACP22760 399 aa12.24□□□□□ -0.45
HDAC6-213ENST00000462730 SERPINF1P36955 418 aa12.24□□□□□ -0.45
HDAC6-213ENST00000462730 VHLLQ6RSH7 139 aa12.24□□□□□ -0.45
HDAC6-213ENST00000462730 MARC2Q969Z3 335 aa12.24□□□□□ -0.45
HDAC6-213ENST00000462730 MOB3AQ96BX8 217 aa12.24□□□□□ -0.45
HDAC6-213ENST00000462730 NARS2Q96I59 477 aaKnown RBP12.24□□□□□ -0.45
HDAC6-213ENST00000462730 NKX6-2Q9C056 277 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-213ENST00000462730 HEATR1Q9H583 2144 aaKnown RBP12.24□□□□□ -0.45
HDAC6-213ENST00000462730 UFSP2Q9NUQ7 469 aa12.24□□□□□ -0.45
HDAC6-213ENST00000462730 DUSP13Q9UII6 198 aa12.24□□□□□ -0.45
HDAC6-213ENST00000462730 POLEQ07864 2286 aa12.24□□□□□ -0.45
HDAC6-213ENST00000462730 PCNX1Q96RV3 2341 aa12.24□□□□□ -0.45
HDAC6-213ENST00000462730 TRBV6-6A0A0A6YYG2 114 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 KIR2DS1A0A191URI9 304 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 C5orf51A6NDU8 294 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 SLC33A1O00400 549 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-213ENST00000462730 CCL21O00585 134 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 ACAA1P09110 424 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-213ENST00000462730 SCTP09683 121 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 KIR2DS4P43632 304 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 NKX6-1P78426 367 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-213ENST00000462730 KIR2DS1Q14954 304 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 ABCA11PQ4W5N1 156 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 FIP1L1Q6UN15 594 aaKnown RBP12.23□□□□□ -0.45
HDAC6-213ENST00000462730 THAP6Q8TBB0 222 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 TLNRD1Q9H1K6 362 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 MBD2Q9UBB5 411 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 TEX13DA0A0J9YY54 714 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-213ENST00000462730 C13orf42A0A1B0GVH6 325 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 A0A1B0GWJ7 208 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 CRYM-AS1A6NIL9 109 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 PCP4L1A6NKN8 68 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 SH2D1BO14796 132 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 WNT9BO14905 357 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 IFNA2P01563 188 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 BTF3P20290 206 aaKnown RBP12.23□□□□□ -0.45
HDAC6-213ENST00000462730 GLRXP35754 106 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 ARHGDIBP52566 201 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 PIGPP57054 158 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 ZNF146Q15072 292 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 SPIN3Q5JUX0 258 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 C20orf204Q6ZNR8 217 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 SGPP2Q8IWX5 399 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 SVBPQ8N300 66 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 INO80EQ8NBZ0 244 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-213ENST00000462730 OR2Z1Q8NG97 314 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 SYT3Q9BQG1 590 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 HES4Q9HCC6 221 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 OR14J1Q9UGF5 321 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 PCDHB10Q9UN67 800 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 ATP23Q9Y6H3 246 aa12.23□□□□□ -0.45
HDAC6-213ENST00000462730 ZNF98A6NK75 572 aa12.22□□□□□ -0.45
HDAC6-213ENST00000462730 F5H0A9 414 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-213ENST00000462730 HAND1O96004 215 aa12.22□□□□□ -0.45
HDAC6-213ENST00000462730 PPYP01298 95 aa12.22□□□□□ -0.45
HDAC6-213ENST00000462730 CD40P25942 277 aa12.22□□□□□ -0.45
HDAC6-213ENST00000462730 RBMXP38159 391 aaKnown RBP12.22□□□□□ -0.45
HDAC6-213ENST00000462730 MDH2P40926 338 aaKnown RBP12.22□□□□□ -0.45
HDAC6-213ENST00000462730 KLF3P57682 345 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-213ENST00000462730 MZT1Q08AG7 82 aa12.22□□□□□ -0.45
HDAC6-213ENST00000462730 WDR82Q6UXN9 313 aa12.22□□□□□ -0.45
HDAC6-213ENST00000462730 WFDC8Q8IUA0 241 aa12.22□□□□□ -0.45
HDAC6-213ENST00000462730 PLPPR1Q8TBJ4 325 aa12.22□□□□□ -0.45
HDAC6-213ENST00000462730 PIK3IP1Q96FE7 263 aa12.22□□□□□ -0.45
HDAC6-213ENST00000462730 RAB18Q9NP72 206 aa12.22□□□□□ -0.45
HDAC6-213ENST00000462730 ADAP1O75689 374 aa12.21□□□□□ -0.45
HDAC6-213ENST00000462730 IGHV3-13P01766 116 aa12.21□□□□□ -0.45
HDAC6-213ENST00000462730 TK1P04183 234 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms