RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 TMEM50BP56557 158 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 DYNC1I2Q13409 638 aaKnown RBP4.67□□□□□ -1.66
VPS36-202ENST00000462289 ZNF273Q14593 569 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 CTF1Q16619 201 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 PIGYQ3MUY2 71 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 CHRFAM7AQ494W8 412 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 GLT8D1Q68CQ7 371 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 C22orf42Q6IC83 251 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 GLIPR1L1Q6UWM5 242 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 ZNF497Q6ZNH5 498 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 Q71RC1 249 aaPredicted RBP4.67□□□□□ -1.66
VPS36-202ENST00000462289 ANKRD13BQ86YJ7 626 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 BOLLQ8N9W6 283 aaKnown RBP4.67□□□□□ -1.66
VPS36-202ENST00000462289 OR11H6Q8NGC7 330 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 KCNG3Q8TAE7 436 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 ZNF596Q8TC21 504 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 NKX3-1Q99801 234 aaPredicted RBP4.67□□□□□ -1.66
VPS36-202ENST00000462289 CENPOQ9BU64 300 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 METTL9Q9H1A3 318 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 LPAR5Q9H1C0 372 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 OR51E2Q9H255 320 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 METTL8Q9H825 291 aaKnown RBP4.67□□□□□ -1.66
VPS36-202ENST00000462289 SPACA1Q9HBV2 294 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 TCF7L1Q9HCS4 588 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 EXOSC4Q9NPD3 245 aaKnown RBP4.67□□□□□ -1.66
VPS36-202ENST00000462289 YAE1D1Q9NRH1 226 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 PCDHB16Q9NRJ7 776 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 TAS2R3Q9NYW6 316 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 HSF4Q9ULV5 492 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 ST3GAL6Q9Y274 331 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 UBE2J1Q9Y385 318 aaPredicted RBP4.67□□□□□ -1.66
VPS36-202ENST00000462289 AUP1Q9Y679 476 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 V9GY05 133 aa4.67□□□□□ -1.66
VPS36-202ENST00000462289 DNHD1Q96M86 4753 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 ODAMA1E959 279 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 C15orf65H3BRN8 121 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 H3BUI4 141 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 PDCD6O75340 191 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 DIRAS3O95661 229 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 IL1AP01583 271 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 IGLV1-47P01700 117 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 ZNF728P0DKX0 622 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 IGHV4-38-2P0DP08 117 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 RAB3BP20337 219 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 DUSP1P28562 367 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 RANBP1P43487 201 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 UBE2E1P51965 193 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 OR10A3P58181 314 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 RPL31P62899 125 aaKnown RBP4.66□□□□□ -1.66
VPS36-202ENST00000462289 BLOC1S1P78537 153 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 PDCD1Q15116 288 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 RSU1Q15404 277 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 NEDD8Q15843 81 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 AANATQ16613 207 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 C17orf58Q2M2W7 97 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 TIMM50Q3ZCQ8 353 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 Q3ZCU0 254 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 SLC22A6Q4U2R8 563 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 LY6G6FQ5SQ64 297 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 LDLRAD2Q5SZI1 272 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 ZNF626Q68DY1 528 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 SLC35E4Q6ICL7 350 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 BTNL3Q6UXE8 466 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 HEPN1Q6WQI6 88 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 Q6ZS49 121 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 JAGN1Q8N5M9 183 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 C8orf31Q8N9H6 132 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 SUMF2Q8NBJ7 301 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 TMEM185AQ8NFB2 350 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 OR10A7Q8NGE5 316 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 OR10K1Q8NGX5 313 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 NANPQ8TBE9 248 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 PLPPR1Q8TBJ4 325 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 ZFAND2BQ8WV99 257 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 ST8SIA4Q92187 359 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 FAM3DQ96BQ1 224 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 CYYR1Q96J86 154 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 KCTD7Q96MP8 289 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 ZNF48Q96MX3 618 aaPredicted RBP4.66□□□□□ -1.66
VPS36-202ENST00000462289 GPER1Q99527 375 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 BCL7BQ9BQE9 202 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 FUNDC2Q9BWH2 189 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 MRPS26Q9BYN8 205 aaKnown RBP4.66□□□□□ -1.66
VPS36-202ENST00000462289 CST11Q9H112 138 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 ELL3Q9HB65 397 aaPredicted RBP4.66□□□□□ -1.66
VPS36-202ENST00000462289 LPAR2Q9HBW0 351 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 STEAP1Q9UHE8 339 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 NUP50Q9UKX7 468 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 GSTK1Q9Y2Q3 226 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 KCNK7Q9Y2U2 307 aa4.66□□□□□ -1.66
VPS36-202ENST00000462289 AK6Q9Y3D8 172 aaKnown RBP4.66□□□□□ -1.66
VPS36-202ENST00000462289 IGHV1-69DA0A0B4J2H0 117 aa4.65□□□□□ -1.67
VPS36-202ENST00000462289 TMEM272A0A1B0GTI8 110 aa4.65□□□□□ -1.67
VPS36-202ENST00000462289 KBTBD11-OT1A0A1B0GTJ5 212 aa4.65□□□□□ -1.67
VPS36-202ENST00000462289 hADV38S2A0JD32 116 aa4.65□□□□□ -1.67
VPS36-202ENST00000462289 VGLL3A8MV65 326 aa4.65□□□□□ -1.67
VPS36-202ENST00000462289 F2RL2O00254 374 aa4.65□□□□□ -1.67
VPS36-202ENST00000462289 MFNGO00587 321 aa4.65□□□□□ -1.67
VPS36-202ENST00000462289 PDCD5O14737 125 aa4.65□□□□□ -1.67
VPS36-202ENST00000462289 DEGS1O15121 323 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms