RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 OR8H3Q8N146 312 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 C8orf31Q8N9H6 132 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 OR52M1Q8NGK5 317 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 RFESDQ8TAC1 157 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 MRGPRDQ8TDS7 321 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 FBLIM1Q8WUP2 373 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 CAPSLQ8WWF8 208 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 RPEQ96AT9 228 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 R3HDM4Q96D70 268 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 MRPS24Q96EL2 167 aaKnown RBP7.29□□□□□ -1.24
BRCA1-207ENST00000461798 PGLYRP3Q96LB9 341 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 PLCXD1Q9NUJ7 323 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 CHCHD3Q9NX63 227 aaKnown RBP7.29□□□□□ -1.24
BRCA1-207ENST00000461798 CNOT2Q9NZN8 540 aaKnown RBP7.29□□□□□ -1.24
BRCA1-207ENST00000461798 ZNF581Q9P0T4 197 aa7.29□□□□□ -1.24
BRCA1-207ENST00000461798 A0A1W2PPI3 338 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 TMEM30CPA0ZSE6 113 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 EFCAB10A6NFE3 127 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 C15orf65H3BRN8 121 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 GEMIN2O14893 280 aaKnown RBP7.28□□□□□ -1.24
BRCA1-207ENST00000461798 ORC5O43913 435 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 OR7C1O76099 320 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-207ENST00000461798 MT-ND4P03905 459 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 LPLP06858 475 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 GTF2F2P13984 249 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 FSTP19883 344 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 TAS2R43P59537 309 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 EBI3Q14213 229 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 LRRC36Q1X8D7 754 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 Q3ZCU0 254 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 ABCA11PQ4W5N1 156 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 ARSJQ5FYB0 599 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-207ENST00000461798 GAPTQ8N292 157 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 LINC00311Q8N616 119 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 OR13C5Q8NGS8 318 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 CYGBQ8WWM9 190 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 TOMM40LQ969M1 308 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 ORAI1Q96D31 301 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 S100A13Q99584 98 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 ZNF184Q99676 751 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-207ENST00000461798 FAM192AQ9GZU8 254 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 SPACA1Q9HBV2 294 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 RCC2Q9P258 522 aaKnown RBP7.28□□□□□ -1.24
BRCA1-207ENST00000461798 CKLFQ9UBR5 152 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 PSORS1C1Q9UIG5 152 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 TSSC4Q9Y5U2 329 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-207ENST00000461798 PLXNB1O43157 2135 aa7.28□□□□□ -1.24
BRCA1-207ENST00000461798 TRAV8-7A0A075B6U6 113 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 TCRBV4S1A1TA0A5B7 111 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 FAM90A10PA6NDY2 464 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 FAM90A7PA6NKC0 464 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 FAM90A23PA8MXZ1 464 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 CASQ2O14958 399 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-207ENST00000461798 FGF16O43320 207 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 GLAP06280 429 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 SNRNP70P08621 437 aaKnown RBP7.27□□□□□ -1.25
BRCA1-207ENST00000461798 SSTR5P35346 364 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 CAPGP40121 348 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 LOXL3P58215 753 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 ZNF816Q0VGE8 651 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-207ENST00000461798 DIAPH2-AS1Q14236 149 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 RBM39Q14498 530 aaKnown RBP7.27□□□□□ -1.25
BRCA1-207ENST00000461798 OXLD1Q5BKU9 147 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 OGFRL1Q5TC84 451 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-207ENST00000461798 RNLSQ5VYX0 342 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 ZNF497Q6ZNH5 498 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 DRAM1Q8N682 238 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 LEAP2Q969E1 77 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 MYDGFQ969H8 173 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 ARL11Q969Q4 196 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 ST6GALNAC6Q969X2 333 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 FKBP14Q9NWM8 211 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 GFOD1Q9NXC2 390 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 MOB4Q9Y3A3 225 aa7.27□□□□□ -1.25
BRCA1-207ENST00000461798 TRAV39A0A0B4J263 110 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 A0A1W2PP11 408 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 MAGEA13PA6NCF6 341 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 SH2D7A6NKC9 451 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-207ENST00000461798 MCRIP1C9JLW8 97 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 CCRL2O00421 344 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 PIN1P1O15428 100 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 CA11O75493 328 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 IGHV3-7P01780 117 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 GAPDHP04406 335 aaKnown RBP7.26□□□□□ -1.25
BRCA1-207ENST00000461798 GNAO1P09471 354 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 SERPINA2P20848 420 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 WNT4P56705 351 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 RCN1Q15293 331 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 TMEM30BQ3MIR4 351 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 SLC22A6Q4U2R8 563 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 ATAD3CQ5T2N8 411 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 STEAP3Q658P3 488 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 GLIPR1L1Q6UWM5 242 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 Q6ZPA2 131 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 C8orf59Q8N0T1 100 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-207ENST00000461798 NANOGP1Q8N7R0 232 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 C5orf56Q8N8D9 126 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 ZFP41Q8N8Y5 198 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 OR4X2Q8NGF9 303 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 OR10X1Q8NGY0 326 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms