RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 TMPRSS2O15393 492 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 PPIHO43447 177 aaKnown RBP12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 ADAM20O43506 726 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 TK1P04183 234 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 CTXN2P0C2S0 81 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 TMEM33P57088 247 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 AESQ08117 197 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 EDDM3AQ14507 147 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 CARTPTQ16568 116 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 VAX1Q5SQQ9 334 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 FAAP20Q6NZ36 180 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 CLEC2AQ6UVW9 174 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 Q6ZS49 121 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 GAPTQ8N292 157 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 ARRDC1Q8N5I2 433 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 ZNRF1Q8ND25 227 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 DUSP18Q8NEJ0 188 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 OR56B4Q8NH76 319 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 CCDC107Q8WV48 283 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 CYYR1Q96J86 154 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 TINAGL1Q9GZM7 467 aaPredicted RBP12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 EHFQ9NZC4 300 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 KIF25Q9UIL4 384 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 MAB21L2Q9Y586 359 aa12.64□□□□□ -0.39
TMEM39A-203ENST00000461654 IGHV4-30-2A0A087WSY4 118 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 A0A096LNT2 108 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 INAFM1C9JVW0 142 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 FABP7O15540 132 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 NDUFB3O43676 98 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 RP2O75695 350 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 GLP1RP43220 463 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 CCR6P51684 374 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 EDDM3BP56851 147 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 PAX5Q02548 391 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 LOXL1Q08397 574 aaPredicted RBP12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 SCGB2B2Q4G0G5 96 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 LRRC10Q5BKY1 277 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 C6orf183Q5T699 404 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 RSBN1Q5VWQ0 802 aaPredicted RBP12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 TRAT1Q6PIZ9 186 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 OR4D10Q8NGI6 311 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 OR51S1Q8NGJ8 323 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 TMEM246Q9BRR3 403 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 SHARPINQ9H0F6 387 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 OCEL1Q9H607 264 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 RAB9BQ9NP90 201 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 NUBP2Q9Y5Y2 271 aa12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 FN1P02751 2386 aaKnown RBP12.63□□□□□ -0.39
TMEM39A-203ENST00000461654 NSD1Q96L73 2696 aaPredicted RBP12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 DYSFO75923 2080 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 LY6HO94772 140 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 TCRBP04435 133 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 SLC25A16P16260 332 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 P2RX3P56373 397 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 SEC61A1P61619 476 aaKnown RBP12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 HLA-DRB3P79483 266 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 RBMS2Q15434 407 aaKnown RBP12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 PLA1AQ53H76 456 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 ZNF880Q6PDB4 577 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 IDO2Q6ZQW0 420 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 SPICQ8N5J4 248 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 FAM216BQ8N7L0 139 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 ZNF565Q8N9K5 539 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 MAPK1IP1LQ8NDC0 245 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 OR4A4PQ8NGN8 299 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 OR6F1Q8NGZ6 308 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 C10orf105Q8TEF2 133 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 FAM168AQ92567 244 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 CREB3L1Q96BA8 519 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 SLC25A21Q9BQT8 299 aaPredicted RBP12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 NCOR1P1Q9H4R4 102 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 OR6C3Q9NZP0 311 aa12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 SLC25A10Q9UBX3 287 aaPredicted RBP12.62□□□□□ -0.39
TMEM39A-203ENST00000461654 CHD3Q12873 2000 aaKnown RBP12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 IGKV1D-8A0A087WSZ0 117 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 ODAMA1E959 279 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 NDUFS8O00217 210 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 SDCBPO00560 298 aaPredicted RBP12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 CD5LO43866 347 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 CRLF1O75462 422 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 IGHV2-70P01814 119 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 GSTT2P0CG29 244 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 OR5H8P0DN80 308 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 SPNP16150 400 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 NDUFB7P17568 137 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 RCC1P18754 421 aaPredicted RBP12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 ERP29P30040 261 aaKnown RBP12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 BTCP35070 178 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 GPR6P46095 362 aaPredicted RBP12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 GLIPR1P48060 266 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 TMEM155Q4W5P6 130 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 AVPI1Q5T686 147 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 Q6ZNX1 250 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 BTN2A1Q7KYR7 527 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 NLRC3Q7RTR2 1065 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 OVCH2Q7RTZ1 564 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 ZNF554Q86TJ5 538 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 ZNF525Q8N782 197 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 COQ2Q96H96 371 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 SLC6A7Q99884 636 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms