RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 LINC00574Q9H8X3 128 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 RAB9BQ9NP90 201 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 TRAPPC2LQ9UL33 140 aa18.38■□□□□ 0.53
C9orf3-209ENST00000460573 IGHV1-69DA0A0B4J2H0 117 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 MEX3AA1L020 520 aaKnown RBP18.37■□□□□ 0.53
C9orf3-209ENST00000460573 POM121CA8CG34 1229 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 RAB27BO00194 218 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 ORC5O43913 435 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 IGHV1-69P01742 117 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 C6orf183Q5T699 404 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 ZNF554Q86TJ5 538 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 OR10A7Q8NGE5 316 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 OR13D1Q8NGV5 346 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 ACOT12Q8WYK0 555 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 ARHGAP5-AS1Q96IT6 56 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 RHBDL2Q9NX52 303 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 CALYQ9NYX4 217 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 RSL24D1Q9UHA3 163 aaKnown RBP18.37■□□□□ 0.53
C9orf3-209ENST00000460573 SESN1Q9Y6P5 492 aa18.37■□□□□ 0.53
C9orf3-209ENST00000460573 RNASEK-C17orf49H0YIS7 233 aa18.36■□□□□ 0.53
C9orf3-209ENST00000460573 C17orf58Q2M2W7 97 aa18.36■□□□□ 0.53
C9orf3-209ENST00000460573 OR5H6Q8NGV6 325 aa18.36■□□□□ 0.53
C9orf3-209ENST00000460573 NDNFQ8TB73 568 aa18.36■□□□□ 0.53
C9orf3-209ENST00000460573 MRGPRDQ8TDS7 321 aa18.36■□□□□ 0.53
C9orf3-209ENST00000460573 DYRK2Q92630 601 aa18.36■□□□□ 0.53
C9orf3-209ENST00000460573 PHF21AQ96BD5 680 aa18.36■□□□□ 0.53
C9orf3-209ENST00000460573 A0A0A6YYH2 397 aa18.35■□□□□ 0.53
C9orf3-209ENST00000460573 CCDC160A6NGH7 325 aa18.35■□□□□ 0.53
C9orf3-209ENST00000460573 A6NJ64 397 aa18.35■□□□□ 0.53
C9orf3-209ENST00000460573 CDK2P24941 298 aa18.35■□□□□ 0.53
C9orf3-209ENST00000460573 PLAC9Q5JTB6 97 aa18.35■□□□□ 0.53
C9orf3-209ENST00000460573 FOXB2Q5VYV0 432 aa18.35■□□□□ 0.53
C9orf3-209ENST00000460573 OR4K15Q8NH41 348 aa18.35■□□□□ 0.53
C9orf3-209ENST00000460573 MRPL30Q8TCC3 161 aaKnown RBP18.35■□□□□ 0.53
C9orf3-209ENST00000460573 CCDC107Q8WV48 283 aa18.35■□□□□ 0.53
C9orf3-209ENST00000460573 AP3S1Q92572 193 aa18.35■□□□□ 0.53
C9orf3-209ENST00000460573 MBNL3Q9NUK0 354 aaKnown RBP18.35■□□□□ 0.53
C9orf3-209ENST00000460573 ZNF69Q9UC07 566 aa18.35■□□□□ 0.53
C9orf3-209ENST00000460573 IGHV3OR16-10A0A075B7F0 116 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 TRBV6-6A0A0A6YYG2 114 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 SERPINE3A8MV23 424 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 NPIPB11E5RHQ5 1161 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 NAPSAO96009 420 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 MOGAT2Q3SYC2 334 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 HCP5Q6MZN7 132 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 ZNF782Q6ZMW2 699 aaPredicted RBP18.34■□□□□ 0.53
C9orf3-209ENST00000460573 ZNF418Q8TF45 676 aaPredicted RBP18.34■□□□□ 0.53
C9orf3-209ENST00000460573 ISOC1Q96CN7 298 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 CMTM3Q96MX0 182 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 ABCG5Q9H222 651 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 TMEM133Q9H2Q1 129 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 IDI2-AS1Q9NZ38 188 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 KCNIP1Q9NZI2 227 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 AK3Q9UIJ7 227 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 MGAT4AQ9UM21 535 aa18.34■□□□□ 0.53
C9orf3-209ENST00000460573 SPINT2O43291 252 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 HIST1H1DP16402 221 aaKnown RBP18.33■□□□□ 0.52
C9orf3-209ENST00000460573 ZNF182P17025 639 aaPredicted RBP18.33■□□□□ 0.52
C9orf3-209ENST00000460573 SOX6P35712 828 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 MRPS15P82914 257 aaKnown RBP18.33■□□□□ 0.52
C9orf3-209ENST00000460573 KLRD1Q13241 179 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 SPCS2Q15005 226 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 TMEM30BQ3MIR4 351 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 MIDNQ504T8 468 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 UBE2NLQ5JXB2 153 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 MZT2AQ6P582 158 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 BRD3OSQ6XYD6 125 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 MOB1BQ7L9L4 216 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 RTN4RL2Q86UN3 420 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 PDZD9Q8IXQ8 264 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 ARL11Q969Q4 196 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 SLC25A38Q96DW6 304 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 CMSS1Q9BQ75 279 aaKnown RBP18.33■□□□□ 0.52
C9orf3-209ENST00000460573 CHMP1AQ9HD42 196 aaPredicted RBP18.33■□□□□ 0.52
C9orf3-209ENST00000460573 C12orf4Q9NQ89 552 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.33■□□□□ 0.52
C9orf3-209ENST00000460573 DIABLOQ9NR28 239 aa18.33■□□□□ 0.52
C9orf3-209ENST00000460573 TRAV39A0A0B4J263 110 aa18.32■□□□□ 0.52
C9orf3-209ENST00000460573 H3BMQ9 156 aa18.32■□□□□ 0.52
C9orf3-209ENST00000460573 MFNGO00587 321 aa18.32■□□□□ 0.52
C9orf3-209ENST00000460573 NPFFO15130 113 aa18.32■□□□□ 0.52
C9orf3-209ENST00000460573 MMP23AO75900 390 aa18.32■□□□□ 0.52
C9orf3-209ENST00000460573 DLX1P56177 255 aa18.32■□□□□ 0.52
C9orf3-209ENST00000460573 PRAMEF5Q5TYX0 476 aa18.32■□□□□ 0.52
C9orf3-209ENST00000460573 PNKDQ8N490 385 aa18.32■□□□□ 0.52
C9orf3-209ENST00000460573 OR11H6Q8NGC7 330 aa18.32■□□□□ 0.52
C9orf3-209ENST00000460573 S100A16Q96FQ6 103 aaKnown RBP18.32■□□□□ 0.52
C9orf3-209ENST00000460573 KIRREL1Q96J84 757 aa18.32■□□□□ 0.52
C9orf3-209ENST00000460573 SUCNR1Q9BXA5 334 aa18.32■□□□□ 0.52
C9orf3-209ENST00000460573 A0A087X0M5 115 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 A0A1B0GX30 115 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 C15orf65H3BRN8 121 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 CD3GP09693 182 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 GNB3P16520 340 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 OMGP23515 440 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 CD34P28906 385 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 SSTR5P35346 364 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 TUSC1Q2TAM9 212 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 CDNFQ49AH0 187 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 ZNF880Q6PDB4 577 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms