RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 TMBIM6P55061 237 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 KIAA2026Q5HYC2 2103 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 PRAMEF5Q5TYX0 476 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 BAIAP2L2Q6UXY1 529 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 Q6ZTK2 550 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 USP43Q70EL4 1123 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 PNKDQ8N490 385 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 OR11H6Q8NGC7 330 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 OR10R2Q8NGX6 335 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 OR4K15Q8NH41 348 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 RAB2BQ8WUD1 216 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 CCDC107Q8WV48 283 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 KIRREL1Q96J84 757 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 ZNF48Q96MX3 618 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-215ENST00000457039 SLC6A7Q99884 636 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 BCL7BQ9BQE9 202 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 DCSTAMPQ9H295 470 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 TMEM133Q9H2Q1 129 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 SPATA2Q9UM82 520 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 JMJD1CQ15652 2540 aa11.52□□□□□ -0.57
SMPD4-215ENST00000457039 A0A087X0M5 115 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 A0A1B0GX30 115 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 METTL21EPA6NDL7 271 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 ODF3BA8MYP8 253 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 MFNGO00587 321 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 NPFFO15130 113 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 ORC5O43913 435 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 RCC1P18754 421 aaPredicted RBP11.51□□□□□ -0.57
SMPD4-215ENST00000457039 COX7A1P24310 79 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 FPR2P25090 351 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 OLFML2AQ68BL7 652 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 ZNF880Q6PDB4 577 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 OR13D1Q8NGV5 346 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 RAB3CQ96E17 227 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 AJUBAQ96IF1 538 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 ATG5Q9H1Y0 275 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 PRDM13Q9H4Q3 707 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 RHBDL2Q9NX52 303 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 IDI2-AS1Q9NZ38 188 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 AK3Q9UIJ7 227 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 CEPT1Q9Y6K0 416 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 C2CD3Q4AC94 2353 aa11.51□□□□□ -0.57
SMPD4-215ENST00000457039 TRBV6-6A0A0A6YYG2 114 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 IGHV2-26A0A0B4J1V2 119 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 A0A0U1RQK1 487 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 A0A1W2PRD5 423 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 A0A1W2PRF3 423 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 A0A1W2PRM7 423 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 C12orf77C9JDV5 145 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 HIST1H1DP16402 221 aaKnown RBP11.5□□□□□ -0.57
SMPD4-215ENST00000457039 CD34P28906 385 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 SPCS2Q15005 226 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 DEFB112Q30KQ8 113 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 MIDNQ504T8 468 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 UTF1Q5T230 341 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 ZNF626Q68DY1 528 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 OR52W1Q6IF63 320 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 ZNF554Q86TJ5 538 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 OR10A7Q8NGE5 316 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 KCTD12Q96CX2 325 aaKnown RBP11.5□□□□□ -0.57
SMPD4-215ENST00000457039 HDHD3Q9BSH5 251 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-215ENST00000457039 SUCNR1Q9BXA5 334 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 RIMS4Q9H426 269 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-215ENST00000457039 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMPD4-215ENST00000457039 TRAPPC2LQ9UL33 140 aa11.5□□□□□ -0.57
SMPD4-215ENST00000457039 MDFIC2A0A1B0GVS7 189 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 F2RL2O00254 374 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 SCGNO76038 276 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 IFNA2P01563 188 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 GNB3P16520 340 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 SAA4P35542 130 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 RORCP51449 518 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 HILS1P60008 231 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 DYNC1I2Q13409 638 aaKnown RBP11.49□□□□□ -0.57
SMPD4-215ENST00000457039 HMGN3Q15651 99 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 LDLRAD2Q5SZI1 272 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 C6orf183Q5T699 404 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 TRAT1Q6PIZ9 186 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 SIGLECL1Q8N7X8 197 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 RFESDQ8TAC1 157 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 ARL11Q969Q4 196 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 ISOC1Q96CN7 298 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 CLEC7AQ9BXN2 247 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 RBM38Q9H0Z9 239 aaKnown RBP11.49□□□□□ -0.57
SMPD4-215ENST00000457039 ABCG5Q9H222 651 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 OCEL1Q9H607 264 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 ZNF286AQ9HBT8 521 aa11.49□□□□□ -0.57
SMPD4-215ENST00000457039 A0A0A6YYJ9 748 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 MEIOCA2RUB1 952 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 FAM172BPA6NC97 362 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 POM121CA8CG34 1229 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 SERPINE3A8MV23 424 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 H3BMQ9 156 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 IGLV1-47P01700 117 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 LOXL3P58215 753 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 C5orf24Q7Z6I8 188 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 ABHD12Q8N2K0 398 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 OR52M1Q8NGK5 317 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 UBALD1Q8TB05 177 aa11.48□□□□□ -0.57
SMPD4-215ENST00000457039 ZNF418Q8TF45 676 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms