RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	FAM230A	A0A1W2PPH8	454 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	CCL24	O00175	119 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	SULT1B1	O43704	296 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	GPX5	O75715	221 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	HCK	P08631	526 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	UCHL1	P09936	223 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	CALR	P27797	417 aa	Known RBP	10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	UBE2V2	Q15819	145 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	GPR107	Q5VW38	600 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	TCF23	Q7RTU1	214 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	SATL1	Q86VE3	508 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	ZNF573	Q86YE8	665 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	ZNF695	Q8IW36	515 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	OR4P4	Q8NGL7	312 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	CHPT1	Q8WUD6	406 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	SPSB1	Q96BD6	273 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	ORAI1	Q96D31	301 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	RAX2	Q96IS3	184 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	HES4	Q9HCC6	221 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	TMEM138	Q9NPI0	162 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	SMAD5-AS1	Q9Y6J3	95 aa		10.4	□□□□□ -0.74
SNHG17-208	ENST00000456953	TRAV8-7	A0A075B6U6	113 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	hADV38S2	A0JD32	116 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	NOL3	O60936	208 aa	Known RBP	10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	ZNF737	O75373	536 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	SC5D	O75845	299 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	MAS1	P04201	325 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	SRM	P19623	302 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	FST	P19883	344 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	BDKRB2	P30411	391 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	FGF9	P31371	208 aa	Predicted RBP	10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	HAAO	P46952	286 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	FUT6	P51993	359 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	SBSPON	Q8IVN8	264 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	OR8H2	Q8N162	312 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	COMMD1	Q8N668	190 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	OR5M8	Q8NGP6	311 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	BORCS8	Q96FH0	119 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	KCTD7	Q96MP8	289 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	DUX3	Q96PT4	197 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	CITED4	Q96RK1	184 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	TXNL4B	Q9NX01	149 aa	Known RBP	10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	LINC00312	Q9Y6C7	94 aa		10.39	□□□□□ -0.75
SNHG17-208	ENST00000456953	IGKV1-9	A0A0C4DH69	117 aa		10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	SNRNP70	P08621	437 aa	Known RBP	10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	IGFBP3	P17936	291 aa	Predicted RBP	10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	RBP2	P50120	134 aa		10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	ATP1B3	P54709	279 aa		10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	MTCP1	P56278	107 aa		10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	LSM3	P62310	102 aa	Known RBP	10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	DDI2	Q5TDH0	399 aa		10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	ZFAND6	Q6FIF0	208 aa		10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	LHFPL2	Q6ZUX7	228 aa		10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	CLVS1	Q8IUQ0	354 aa	Predicted RBP	10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	DNAAF1	Q8NEP3	725 aa		10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	OR51A2	Q8NGJ7	313 aa		10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	ZNF596	Q8TC21	504 aa		10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	CPNE2	Q96FN4	548 aa	Predicted RBP	10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	GPER1	Q99527	375 aa		10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	CENPO	Q9BU64	300 aa		10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	PPIL3	Q9H2H8	161 aa	Known RBP	10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	MOB4	Q9Y3A3	225 aa		10.38	□□□□□ -0.75
SNHG17-208	ENST00000456953	PQLC2L	A1A4F0	135 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	CCDC160	A6NGH7	325 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	LEUTX	A8MZ59	168 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	SEC14L6	B5MCN3	397 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	PDCD5	O14737	125 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	ERVK11-1	P61568	191 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	SLC35B1	P78383	322 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	EDDM3A	Q14507	147 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	ZNF529	Q6P280	563 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	RTN4RL2	Q86UN3	420 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	ANKRD13B	Q86YJ7	626 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	ABHD12	Q8N2K0	398 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	NKAIN3	Q8N8D7	197 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	OR52N4	Q8NGI2	321 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	OR8U1	Q8NH10	309 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	CREB3L1	Q96BA8	519 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	NOL4L	Q96MY1	436 aa	Predicted RBP	10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	ZMAT4	Q9H898	229 aa		10.37	□□□□□ -0.75
SNHG17-208	ENST00000456953	SORL1	Q92673	2214 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	TRAV1-2	A0A0B4J238	106 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	SERPINE3	A8MV23	424 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	GABARAP	O95166	117 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	IGLV1-47	P01700	117 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	FAM106CP	P0CH98	169 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	MPZ	P25189	248 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	ZNF93	P35789	620 aa	Predicted RBP	10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	CEACAM3	P40198	252 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	MTNR1B	P49286	362 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	POU3F4	P49335	361 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	KISS1	Q15726	138 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	GLT8D1	Q68CQ7	371 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	CCDC144NL	Q6NUI1	221 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	LRRTM1	Q86UE6	522 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	ANGPTL5	Q86XS5	388 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	BATF2	Q8N1L9	274 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	JAGN1	Q8N5M9	183 aa		10.36	□□□□□ -0.75
SNHG17-208	ENST00000456953	RFT1	Q96AA3	541 aa		10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms