RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 CROCCP3Q8IVE0 287 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 PIP4P2Q8N4L2 257 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 OR1L1Q8NH94 360 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 SETD6Q8TBK2 473 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 MAFIPQ8WZ33 124 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 METTL8Q9H825 291 aaKnown RBP11.48□□□□□ -0.57
TIMP1-205ENST00000456754 CALYQ9NYX4 217 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 LPAR3Q9UBY5 353 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 RSL24D1Q9UHA3 163 aaKnown RBP11.48□□□□□ -0.57
TIMP1-205ENST00000456754 CDC42EP3Q9UKI2 254 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 TRAPPC2LQ9UL33 140 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 HSF4Q9ULV5 492 aa11.48□□□□□ -0.57
TIMP1-205ENST00000456754 MXRA5Q9NR99 2828 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 TRAV18A0A075B6X5 111 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 IGHV3-43A0A0B4J1X8 118 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 KBTBD11-OT1A0A1B0GTJ5 212 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 FUOMA2VDF0 154 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 METTL21EPA6NDL7 271 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 TMEM235A6NFC5 223 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 C12orf77C9JDV5 145 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 NOL3O60936 208 aaKnown RBP11.47□□□□□ -0.57
TIMP1-205ENST00000456754 NAPSAO96009 420 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 GLAP06280 429 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 IGHV3-43DP0DP04 118 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 SRD5A1P18405 259 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 ELK1P19419 428 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 EPHA1P21709 976 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 CDNFQ49AH0 187 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 UBE2NLQ5JXB2 153 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 LDLRAD2Q5SZI1 272 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 PRR18Q8N4B5 295 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 NANPQ8TBE9 248 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 NUDCD2Q8WVJ2 157 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 GCDHQ92947 438 aaPredicted RBP11.47□□□□□ -0.57
TIMP1-205ENST00000456754 POM121Q96HA1 1249 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 ZNF48Q96MX3 618 aaPredicted RBP11.47□□□□□ -0.57
TIMP1-205ENST00000456754 SLC6A7Q99884 636 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 BCL7BQ9BQE9 202 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 DCUN1D5Q9BTE7 237 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 MIXL1Q9H2W2 232 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 CHMP1AQ9HD42 196 aaPredicted RBP11.47□□□□□ -0.57
TIMP1-205ENST00000456754 OR6C3Q9NZP0 311 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 ZNF230Q9UIE0 474 aaPredicted RBP11.47□□□□□ -0.57
TIMP1-205ENST00000456754 NUP50Q9UKX7 468 aa11.47□□□□□ -0.57
TIMP1-205ENST00000456754 IGKV1D-8A0A087WSZ0 117 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 IGHV1-69DA0A0B4J2H0 117 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 ZNF729A6NN14 1252 aaPredicted RBP11.46□□□□□ -0.57
TIMP1-205ENST00000456754 CTDSP2O14595 271 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 SSX5O60225 188 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 IGHV1-69P01742 117 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 HNF1AP20823 631 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 NFYBP25208 207 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 ZNF260Q3ZCT1 412 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 C1orf122Q6ZSJ8 110 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 ARL11Q969Q4 196 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 KCTD12Q96CX2 325 aaKnown RBP11.46□□□□□ -0.57
TIMP1-205ENST00000456754 AJUBAQ96IF1 538 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 KIRREL1Q96J84 757 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 CMSS1Q9BQ75 279 aaKnown RBP11.46□□□□□ -0.57
TIMP1-205ENST00000456754 NCOR1P1Q9H4R4 102 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 ZNF286AQ9HBT8 521 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 TAS2R3Q9NYW6 316 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 SESN1Q9Y6P5 492 aa11.46□□□□□ -0.57
TIMP1-205ENST00000456754 A0A0U1RQK1 487 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 A0A1W2PPE3 182 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 A0A1W2PPH5 198 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 NPIPB11E5RHQ5 1161 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 HBZP02008 142 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 FCER2P06734 321 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 SCAND1P57086 179 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 GUCA2AQ02747 115 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 GNMTQ14749 295 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 GPR157Q5UAW9 335 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 ZNF880Q6PDB4 577 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 HEPN1Q6WQI6 88 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 LHFPL4Q7Z7J7 247 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 LAX1Q8IWV1 398 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 ZNF565Q8N9K5 539 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 DMRTB1Q96MA1 342 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 SLIRPQ9GZT3 109 aaKnown RBP11.45□□□□□ -0.58
TIMP1-205ENST00000456754 ABCG5Q9H222 651 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 GAL3ST2Q9H3Q3 398 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 UNKLQ9H9P5 680 aaKnown RBP11.45□□□□□ -0.58
TIMP1-205ENST00000456754 TAF9BQ9HBM6 251 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 MBNL3Q9NUK0 354 aaKnown RBP11.45□□□□□ -0.58
TIMP1-205ENST00000456754 IDI2-AS1Q9NZ38 188 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 CCDC59Q9P031 241 aaKnown RBP11.45□□□□□ -0.58
TIMP1-205ENST00000456754 JMJD1CQ15652 2540 aa11.45□□□□□ -0.58
TIMP1-205ENST00000456754 IGHV2-26A0A0B4J1V2 119 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 MEIS3P1A6NDR6 274 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 NPFFO15130 113 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 SCTP09683 121 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 CD3GP09693 182 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 GNG10P50151 68 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 LOXL3P58215 753 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 ARFRP1Q13795 201 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 DEFB112Q30KQ8 113 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 DYNAPQ8N1N2 210 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 OR52L2PQ8NGH6 319 aa11.44□□□□□ -0.58
TIMP1-205ENST00000456754 OR10V1Q8NGI7 309 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms