RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ST8SIA3O43173 380 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 S100A9P06702 114 aaKnown RBP10.63□□□□□ -0.71
LINC00959-201ENST00000456581 ATP6V0CP27449 155 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 RBP2P50120 134 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 PLCXD3Q63HM9 321 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 SLC25A26Q70HW3 274 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 OR2G3Q8NGZ4 309 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 PAPOLGQ9BWT3 736 aaKnown RBP10.63□□□□□ -0.71
LINC00959-201ENST00000456581 ZNF552Q9H707 407 aaPredicted RBP10.63□□□□□ -0.71
LINC00959-201ENST00000456581 PLEKHA2Q9HB19 425 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 PCNX1Q96RV3 2341 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 TGIF2-C20orf24A0A0A6YYL0 155 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 BORCS7-ASMTA0A0B4J1R7 106 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 MMP7P09237 267 aaPredicted RBP10.63□□□□□ -0.71
LINC00959-201ENST00000456581 EDN3P14138 238 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 GLP1RP43220 463 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 NDUFA6P56556 154 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 PPA1Q15181 289 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 ODF3L1Q8IXM7 274 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 OSR2Q8N2R0 312 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 GGACTQ9BVM4 153 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 HSF4Q9ULV5 492 aa10.63□□□□□ -0.71
LINC00959-201ENST00000456581 IGKV1D-13A0A0B4J2D9 117 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 SCTP09683 121 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 SEC11BP0C7V7 166 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 IGKV1-13P0DP09 117 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 ERVFRD-1P60508 538 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 TSC22D1Q15714 1073 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 FAM189A2Q15884 450 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 PRSS33Q8NF86 280 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 BOD1Q96IK1 185 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 SLC35B3Q9H1N7 401 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 SPRR3Q9UBC9 169 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 SLC7A11Q9UPY5 501 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 HSD17B6O14756 317 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 ADAM20O43506 726 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 SMIM6P0DI80 62 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 GNRHRP30968 328 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 SLC10A1Q14973 349 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 C4orf17Q53FE4 359 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 ZNF766Q5HY98 468 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 RIPPLY2Q5TAB7 128 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 FDCSPQ8NFU4 85 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 OR51B6Q9H340 312 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 ASCL3Q9NQ33 180 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 PRSS50Q9UI38 385 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 USF3Q68DE3 2245 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 IGKV3D-15A0A087WSY6 115 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 C3orf85A0A1B0GTC6 90 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 K7N7A8 449 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 OR2C1O95371 312 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 SYNGR4O95473 234 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 PPYP01298 95 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 TCF15Q12870 199 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 ZNF154Q13106 437 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 SPSB3Q6PJ21 355 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 FAM180AQ6UWF9 173 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 ZNF818PQ6ZRF7 136 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 TBC1D26Q86UD7 250 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 OR5C1Q8NGR4 320 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 UBALD1Q8TB05 177 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 Q8WTZ3 238 aa10.62□□□□□ -0.71
LINC00959-201ENST00000456581 METTL1Q9UBP6 276 aaKnown RBP10.62□□□□□ -0.71
LINC00959-201ENST00000456581 KLF13Q9Y2Y9 288 aaPredicted RBP10.62□□□□□ -0.71
LINC00959-201ENST00000456581 KLRC4-KLRK1H3BQV0 150 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 HERV-K104P61576 105 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 OR2B11Q5JQS5 317 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 SOHLH1Q5JUK2 328 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 LGI3Q8N145 548 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 OR2C3Q8N628 320 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 ZNF611Q8N823 705 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 SUMF2Q8NBJ7 301 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 OR4D5Q8NGN0 318 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 MOB3AQ96BX8 217 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 GALNT14Q96FL9 552 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 YPEL4Q96NS1 127 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 FGF23Q9GZV9 251 aaPredicted RBP10.61□□□□□ -0.71
LINC00959-201ENST00000456581 PTPRBP23467 1997 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 TRAV39A0A0B4J263 110 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 AP4M1O00189 453 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 CD46P15529 392 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 LMO1P25800 156 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 PCBD1P61457 104 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 RND3P61587 244 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 KIAA0141Q14154 515 aaPredicted RBP10.61□□□□□ -0.71
LINC00959-201ENST00000456581 GAPTQ8N292 157 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 CYB561D1Q8N8Q1 229 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 RAB39BQ96DA2 213 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 ZNF488Q96MN9 340 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 OR51M1Q9H341 326 aa10.61□□□□□ -0.71
LINC00959-201ENST00000456581 C5orf49A4QMS7 147 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 MPPED1O15442 326 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 NGFP01138 241 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 BCL3P20749 454 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 DYNLT3P51808 116 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 HIKESHIQ53FT3 197 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 ZNF600Q6ZNG1 722 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 TMEM45BQ96B21 275 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 ZNF286AQ9HBT8 521 aa10.6□□□□□ -0.71
LINC00959-201ENST00000456581 DOK5Q9P104 306 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms