RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 LIPFP07098 398 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 STAG3L3P0CL85 134 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 PNLIPP16233 465 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 ARF6P62330 175 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 ZP4Q12836 540 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 ZNF77Q15935 545 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 KCNMB1Q16558 191 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 CDKN3Q16667 212 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 OR8B12Q8NGG6 310 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 OR5A1Q8NGJ0 315 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 OR1L3Q8NH93 324 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 RNASEH2CQ8TDP1 164 aaKnown RBP4.39□□□□□ -1.71
PCDH9-203ENST00000456367 TAF15Q92804 592 aaKnown RBP eCLIP4.39□□□□□ -1.71
PCDH9-203ENST00000456367 MRGPRX1Q96LB2 322 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 TMEM70Q9BUB7 260 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 STRADBQ9C0K7 418 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 FAM206AQ9NX38 181 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 SPRY1O43609 319 aaPredicted RBP4.39□□□□□ -1.71
PCDH9-203ENST00000456367 C1QL1O75973 258 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 EPHA8P29322 1005 aaPredicted RBP4.39□□□□□ -1.71
PCDH9-203ENST00000456367 FOLR3P41439 243 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 RPS15P62841 145 aaKnown RBP4.39□□□□□ -1.71
PCDH9-203ENST00000456367 C2orf68Q2NKX9 166 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 ABHD17BQ5VST6 288 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 MRPL54Q6P161 138 aaKnown RBP4.39□□□□□ -1.71
PCDH9-203ENST00000456367 CD99L2Q8TCZ2 262 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 ABHD5Q8WTS1 349 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 TMEM45BQ96B21 275 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 CDCA3Q99618 268 aaPredicted RBP4.39□□□□□ -1.71
PCDH9-203ENST00000456367 QTRT1Q9BXR0 403 aaKnown RBP4.39□□□□□ -1.71
PCDH9-203ENST00000456367 HIF1ANQ9NWT6 349 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 PRR13Q9NZ81 148 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 TAAR3PQ9P1P4 343 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 TBC1D29Q9UFV1 150 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 OR2W1Q9Y3N9 320 aa4.39□□□□□ -1.71
PCDH9-203ENST00000456367 A0A0U1RQV5 110 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 OR2W5A6NFC9 320 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 ZNF891A8MT65 544 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-203ENST00000456367 A8MWL6 223 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 TMEM14DPA8MWL7 114 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 RPL36A-HNRNPH2H7BZ11 118 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 LEPROTL1O95214 131 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 CER1O95813 267 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 NUDT3O95989 172 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 HOXC4P09017 264 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-203ENST00000456367 G6PCP35575 357 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 MPLP40238 635 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 LBX1P52954 281 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 DCDP81605 110 aaKnown RBP4.38□□□□□ -1.71
PCDH9-203ENST00000456367 C10orf91Q5T1B1 145 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 RTN4RL1Q86UN2 441 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-203ENST00000456367 GAPTQ8N292 157 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 OR2Y1Q8NGV0 311 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 APOBEC4Q8WW27 367 aaKnown RBP4.38□□□□□ -1.71
PCDH9-203ENST00000456367 SARGQ9BW04 601 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 MRPS2Q9Y399 296 aaKnown RBP4.38□□□□□ -1.71
PCDH9-203ENST00000456367 TRIP11Q15643 1979 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 COL18A1P39060 1754 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 PMS2P1A4D2B8 440 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 LINC01387J3KSC0 135 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 BGLAPP02818 100 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 CLEC3BP05452 202 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 CEBPBP17676 345 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 GDF1P27539 372 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 TCL1AP56279 114 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 TMEM187Q14656 261 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 OR1C1Q15619 314 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 CLDND2Q8NHS1 167 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 DPF1Q92782 380 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 LSM10Q969L4 123 aaKnown RBP4.38□□□□□ -1.71
PCDH9-203ENST00000456367 TMEM56Q96MV1 263 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 RNF126Q9BV68 326 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 FGF22Q9HCT0 170 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 NHSL1Q5SYE7 1610 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 LOC102724200A0A096LPH7 203 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-203ENST00000456367 C19orf67A6NJJ6 358 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 NEURL1O76050 574 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 CD160O95971 181 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 ASAH2BP0C7U1 165 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 MDKP21741 143 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-203ENST00000456367 LSM11P83369 360 aaKnown RBP eCLIP4.38□□□□□ -1.71
PCDH9-203ENST00000456367 NR0B2Q15466 257 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 ZNF766Q5HY98 468 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 C1QL3Q5VWW1 255 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 C17orf99Q6UX52 265 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 RABEPKQ7Z6M1 372 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 KMT5CQ86Y97 462 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 CPEB3Q8NE35 698 aaKnown RBP4.38□□□□□ -1.71
PCDH9-203ENST00000456367 MRGPRDQ8TDS7 321 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 RHBDD1Q8TEB9 315 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 COX14Q96I36 57 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 VSTM2LQ96N03 204 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 TMEM208Q9BTX3 173 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 PRDM13Q9H4Q3 707 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 GPR27Q9NS67 375 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 ZNF835Q9Y2P0 537 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 PTPRFP10586 1907 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 EVPLQ92817 2033 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 PHLPP1O60346 1717 aa4.38□□□□□ -1.71
PCDH9-203ENST00000456367 TRAV30A0A087WSZ9 112 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms