RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 MYRFQ9Y2G1 1151 aa13.21□□□□□ -0.29
UBE2D4-209ENST00000454428 C15orf65H3BRN8 121 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 ATP6V0E1O15342 81 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 SLC31A2O15432 143 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 SNX3O60493 162 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 OR8U9P0C7N5 309 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 EPHA2P29317 976 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 MTNR1BP49286 362 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 GALEQ14376 348 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 C8orf31Q8N9H6 132 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 MINDY2Q8NBR6 621 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 OR51A4Q8NGJ6 313 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 OR13C9Q8NGT0 318 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 TMEM163Q8TC26 289 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 NR1H4Q96RI1 486 aaPredicted RBP13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 BARHL1Q9BZE3 327 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 NEK6Q9HC98 313 aa13.2□□□□□ -0.3
UBE2D4-209ENST00000454428 GNGT2O14610 69 aa13.19□□□□□ -0.3
UBE2D4-209ENST00000454428 ZNF20P17024 532 aa13.19□□□□□ -0.3
UBE2D4-209ENST00000454428 C19orf54Q5BKX5 351 aa13.19□□□□□ -0.3
UBE2D4-209ENST00000454428 OR2G2Q8NGZ5 317 aa13.19□□□□□ -0.3
UBE2D4-209ENST00000454428 UBALD1Q8TB05 177 aa13.19□□□□□ -0.3
UBE2D4-209ENST00000454428 CANT1Q8WVQ1 401 aa13.19□□□□□ -0.3
UBE2D4-209ENST00000454428 RITA1Q96K30 269 aa13.19□□□□□ -0.3
UBE2D4-209ENST00000454428 GHITMQ9H3K2 345 aa13.19□□□□□ -0.3
UBE2D4-209ENST00000454428 ZCCHC4Q9H5U6 513 aa13.19□□□□□ -0.3
UBE2D4-209ENST00000454428 RETNQ9HD89 108 aa13.19□□□□□ -0.3
UBE2D4-209ENST00000454428 FRRS1LQ9P0K9 344 aa13.19□□□□□ -0.3
UBE2D4-209ENST00000454428 IGHV7-81A0A0B4J1V7 117 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 RBMY1BA6NDE4 496 aaKnown RBP13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 RBMY1EA6NEQ0 496 aaKnown RBP13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 HSPA12AO43301 675 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 SOX15O60248 233 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 IGLV1-51P01701 117 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 ISG15P05161 165 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 RBMY1DP0C7P1 496 aaKnown RBP13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 OR2T7P0C7T2 308 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 DAPP51397 102 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 ZNF137PP52743 207 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 NANOS3P60323 173 aaKnown RBP13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 ZNF85Q03923 595 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 TP53I3Q53FA7 332 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 TMEM244Q5VVB8 128 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 ELP2Q6IA86 826 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 FAHD1Q6P587 224 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 SGPP2Q8IWX5 399 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 CASTOR1Q8WTX7 329 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 UTP4Q969X6 686 aaKnown RBP13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 IL4I1Q96RQ9 567 aa13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 H2AFY2Q9P0M6 372 aaPredicted RBP13.18□□□□□ -0.3
UBE2D4-209ENST00000454428 IGHV3-43A0A0B4J1X8 118 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 TRAV41A0A0B4J266 112 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 LGALS1P09382 135 aaKnown RBP13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 IGHV3-43DP0DP04 118 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 CNTFRP26992 372 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 ZNF134P52741 427 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 PIGYQ3MUY2 71 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 C12orf73Q69YU5 71 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 ZNF439Q8NDP4 499 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 OR10H4Q8NGA5 316 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 OR52M1Q8NGK5 317 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 PARP11Q9NR21 331 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 ZNF446Q9NWS9 450 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 GFOD1Q9NXC2 390 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 GNG8Q9UK08 70 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 FBXO7Q9Y3I1 522 aa13.17□□□□□ -0.3
UBE2D4-209ENST00000454428 SDCBPO00560 298 aaPredicted RBP13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 HLA-DRB1P01911 266 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 IFNA6P05013 189 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 TMEM225BP0DP42 221 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 DBTP11182 482 aaKnown RBP13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 BLVRBP30043 206 aaPredicted RBP13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 KCNJ3P48549 501 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 PITPNAQ00169 270 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 KISS1Q15726 138 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 ZSCAN26Q16670 478 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 SLC25A48Q6ZT89 311 aaKnown RBP13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 GID4Q8IVV7 300 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 ARHGAP24Q8N264 748 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 LINC00476Q8WZB0 136 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 EME1Q96AY2 570 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 ASB9Q96DX5 294 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 OR4C12Q96R67 309 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 FAM107BQ9H098 131 aa13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 ARGLU1Q9NWB6 273 aaPredicted RBP13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 CHCHD3Q9NX63 227 aaKnown RBP13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 WARS2Q9UGM6 360 aaKnown RBP13.16□□□□□ -0.3
UBE2D4-209ENST00000454428 ZAR1LA6NP61 321 aa13.15□□□□□ -0.3
UBE2D4-209ENST00000454428 B2RBV5 119 aa13.15□□□□□ -0.3
UBE2D4-209ENST00000454428 MITFO75030 526 aaPredicted RBP13.15□□□□□ -0.3
UBE2D4-209ENST00000454428 OCM2P0CE71 109 aa13.15□□□□□ -0.3
UBE2D4-209ENST00000454428 OCMP0CE72 109 aaPredicted RBP13.15□□□□□ -0.3
UBE2D4-209ENST00000454428 ARSBP15848 533 aa13.15□□□□□ -0.3
UBE2D4-209ENST00000454428 NDPQ00604 133 aa13.15□□□□□ -0.3
UBE2D4-209ENST00000454428 IL13RA2Q14627 380 aa13.15□□□□□ -0.3
UBE2D4-209ENST00000454428 MMDQ15546 238 aa13.15□□□□□ -0.3
UBE2D4-209ENST00000454428 SUMF2Q8NBJ7 301 aa13.15□□□□□ -0.3
UBE2D4-209ENST00000454428 DNAJC9Q8WXX5 260 aa13.15□□□□□ -0.3
UBE2D4-209ENST00000454428 ARL11Q969Q4 196 aa13.15□□□□□ -0.3
UBE2D4-209ENST00000454428 THAP7Q9BT49 309 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms