RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 LYPD6Q86Y78 171 aa14.64□□□□□ -0.07
UBE2D4-208ENST00000454350 ST6GALNAC6Q969X2 333 aa14.64□□□□□ -0.07
UBE2D4-208ENST00000454350 ZNF184Q99676 751 aaPredicted RBP14.64□□□□□ -0.07
UBE2D4-208ENST00000454350 EXOSC1Q9Y3B2 195 aaKnown RBP14.64□□□□□ -0.07
UBE2D4-208ENST00000454350 DNAH9Q9NYC9 4486 aa14.64□□□□□ -0.07
UBE2D4-208ENST00000454350 TRBV5-7A0A0A0MS05 114 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 TMEM30CPA0ZSE6 113 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 FGF16O43320 207 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 MT-ND4P03905 459 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 GZMHP20718 246 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 RIPK1Q13546 671 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 MPV17LQ2QL34 196 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 ZNF497Q6ZNH5 498 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 LINC00596Q86U02 117 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 ZNF329Q86UD4 541 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 LINC00311Q8N616 119 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 Q8N6K4 173 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 ZFP41Q8N8Y5 198 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 OR52M1Q8NGK5 317 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 UBALD1Q8TB05 177 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 CYYR1Q96J86 154 aa14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 NOL4LQ96MY1 436 aaPredicted RBP14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 RCC2Q9P258 522 aaKnown RBP14.63□□□□□ -0.07
UBE2D4-208ENST00000454350 IGHV1-3A0A0C4DH29 117 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 IRGMA1A4Y4 181 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 PSMB11A5LHX3 300 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 IGKV1D-33P01593 117 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 IGKV1-33P01594 117 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 CSTBP04080 98 aaKnown RBP14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 TMEM11P17152 192 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 FSTP19883 344 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 HNF4GQ14541 408 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 Q499Y3 187 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 C18orf65Q6ZTR6 163 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 LINC00482Q8N8I6 264 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 C8orf31Q8N9H6 132 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 TMEM104Q8NE00 496 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 OR10X1Q8NGY0 326 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 GGHQ92820 318 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 TMEM80Q96HE8 168 aa14.62□□□□□ -0.07
UBE2D4-208ENST00000454350 LINC01548A6NM66 108 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 K7EIL1 84 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 EBAG9O00559 213 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 HSD17B6O14756 317 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 IGHG2P01859 326 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 PF4P02776 101 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 MYL12AP19105 171 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 KRTAP10-11P60412 298 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 HES1Q14469 280 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 LRRC36Q1X8D7 754 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 SLC22A6Q4U2R8 563 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 YIF1BQ5BJH7 314 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 GAPTQ8N292 157 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 ZNF439Q8NDP4 499 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 CCDC107Q8WV48 283 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 ARL11Q969Q4 196 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 EAF1Q96JC9 268 aaPredicted RBP14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 PAK1IP1Q9NWT1 392 aaPredicted RBP14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 GFOD1Q9NXC2 390 aa14.61□□□□□ -0.07
UBE2D4-208ENST00000454350 SLC31A2O15432 143 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 ORC5O43913 435 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 ZNF780AO75290 641 aaPredicted RBP14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 GTF2F2P13984 249 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 REG1BP48304 166 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 RPL23AP62750 156 aaKnown RBP14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 SLC35A2P78381 396 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 ST3GAL4Q11206 333 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 ATAD3CQ5T2N8 411 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 TTC23Q5W5X9 447 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 IZUMO1Q8IYV9 350 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 CYGBQ8WWM9 190 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 MUL1Q969V5 352 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 RBMXL1Q96E39 390 aaKnown RBP14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 RCC1LQ96I51 464 aaKnown RBP14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 OR14A2Q96R54 314 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 PLSCR3Q9NRY6 295 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 LINC00527Q9UJ94 153 aa14.6□□□□□ -0.07
UBE2D4-208ENST00000454350 IGHV3-43A0A0B4J1X8 118 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 IGHV3-72A0A0B4J1Y9 119 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 A0A1W2PPK0 400 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 C12orf77C9JDV5 145 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 CCRL2O00421 344 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 SDCBPO00560 298 aaPredicted RBP14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 GAPDHP04406 335 aaKnown RBP14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 GNAO1P09471 354 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 IGHV3-43DP0DP04 118 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 EGFEM1PQ0D2K5 195 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 KHDC1LQ5JSQ8 128 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 SIGIRRQ6IA17 410 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 OR2W3Q7Z3T1 314 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 MRPL41Q8IXM3 137 aaKnown RBP14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 PACRGLQ8N7B6 248 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 Q8N9W7 124 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 CHPT1Q8WUD6 406 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 FBLIM1Q8WUP2 373 aa14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 MRPS28Q9Y2Q9 187 aaKnown RBP14.59□□□□□ -0.07
UBE2D4-208ENST00000454350 ZNF736B4DX44 427 aaPredicted RBP14.58□□□□□ -0.08
UBE2D4-208ENST00000454350 MPIG6BO95866 241 aa14.58□□□□□ -0.08
UBE2D4-208ENST00000454350 VHLP40337 213 aa14.58□□□□□ -0.08
UBE2D4-208ENST00000454350 THBS3P49746 956 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms