RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 AJUBAQ96IF1 538 aa22.77■■□□□ 1.24
SMARCC1-203ENST00000454240 PLEKHJ1Q9NW61 149 aa22.77■■□□□ 1.24
SMARCC1-203ENST00000454240 IGHV2-26A0A0B4J1V2 119 aa22.76■■□□□ 1.23
SMARCC1-203ENST00000454240 ODF3BA8MYP8 253 aa22.76■■□□□ 1.23
SMARCC1-203ENST00000454240 SSTR5P35346 364 aa22.76■■□□□ 1.23
SMARCC1-203ENST00000454240 ZNF626Q68DY1 528 aa22.76■■□□□ 1.23
SMARCC1-203ENST00000454240 RTN4RL2Q86UN3 420 aa22.76■■□□□ 1.23
SMARCC1-203ENST00000454240 OR56B1Q8NGI3 324 aa22.76■■□□□ 1.23
SMARCC1-203ENST00000454240 OR4K15Q8NH41 348 aa22.76■■□□□ 1.23
SMARCC1-203ENST00000454240 ZDHHC16Q969W1 377 aa22.76■■□□□ 1.23
SMARCC1-203ENST00000454240 KIRREL1Q96J84 757 aa22.76■■□□□ 1.23
SMARCC1-203ENST00000454240 FAM96BQ9Y3D0 163 aa22.76■■□□□ 1.23
SMARCC1-203ENST00000454240 FBN1P35555 2871 aaKnown RBP22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 A0A087X0M5 115 aa22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 A0A1B0GX30 115 aa22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 C15orf65H3BRN8 121 aa22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 ORC5O43913 435 aa22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 CD34P28906 385 aa22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 BAMBIQ13145 260 aa22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 FAM189A2Q15884 450 aa22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 SLC16A12Q6ZSM3 486 aa22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 ANKRD13BQ86YJ7 626 aa22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 OR10A7Q8NGE5 316 aa22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 CLEC7AQ9BXN2 247 aa22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 IDI2-AS1Q9NZ38 188 aa22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 TRAPPC2LQ9UL33 140 aa22.75■■□□□ 1.23
SMARCC1-203ENST00000454240 ARG1P05089 322 aa22.74■■□□□ 1.23
SMARCC1-203ENST00000454240 FBP1P09467 338 aa22.74■■□□□ 1.23
SMARCC1-203ENST00000454240 RPS19P39019 145 aaKnown RBP22.74■■□□□ 1.23
SMARCC1-203ENST00000454240 Q6ZTK2 550 aa22.74■■□□□ 1.23
SMARCC1-203ENST00000454240 LDLRAD3Q86YD5 345 aa22.74■■□□□ 1.23
SMARCC1-203ENST00000454240 ABHD12Q8N2K0 398 aa22.74■■□□□ 1.23
SMARCC1-203ENST00000454240 RFESDQ8TAC1 157 aa22.74■■□□□ 1.23
SMARCC1-203ENST00000454240 MRPL30Q8TCC3 161 aaKnown RBP22.74■■□□□ 1.23
SMARCC1-203ENST00000454240 C17orf50Q8WW18 174 aa22.74■■□□□ 1.23
SMARCC1-203ENST00000454240 MBNL3Q9NUK0 354 aaKnown RBP22.74■■□□□ 1.23
SMARCC1-203ENST00000454240 ATRQ13535 2644 aa22.74■■□□□ 1.23
SMARCC1-203ENST00000454240 DNAJC9-AS1A6NH13 148 aa22.73■■□□□ 1.23
SMARCC1-203ENST00000454240 TMEM127O75204 238 aa22.73■■□□□ 1.23
SMARCC1-203ENST00000454240 MELTFP08582 738 aa22.73■■□□□ 1.23
SMARCC1-203ENST00000454240 SNRPBP14678 240 aaKnown RBP22.73■■□□□ 1.23
SMARCC1-203ENST00000454240 LGALS4P56470 323 aa22.73■■□□□ 1.23
SMARCC1-203ENST00000454240 NCS1P62166 190 aa22.73■■□□□ 1.23
SMARCC1-203ENST00000454240 PLAC9Q5JTB6 97 aa22.73■■□□□ 1.23
SMARCC1-203ENST00000454240 ARL11Q969Q4 196 aa22.73■■□□□ 1.23
SMARCC1-203ENST00000454240 ARHGAP5-AS1Q96IT6 56 aa22.73■■□□□ 1.23
SMARCC1-203ENST00000454240 PECRQ9BY49 303 aa22.73■■□□□ 1.23
SMARCC1-203ENST00000454240 TBL2Q9Y4P3 447 aaKnown RBP22.73■■□□□ 1.23
SMARCC1-203ENST00000454240 CLDN34H7C241 214 aa22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 RAB27BO00194 218 aa22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 RCC1P18754 421 aaPredicted RBP22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 SCAND1P57086 179 aa22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 DYNC1I2Q13409 638 aaKnown RBP22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 SLC9A3R2Q15599 337 aa22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 MOGAT2Q3SYC2 334 aa22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 UTF1Q5T230 341 aa22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 C6orf183Q5T699 404 aa22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 IDNKQ5T6J7 187 aa22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 CROCCP3Q8IVE0 287 aa22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 ZFAND2BQ8WV99 257 aa22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 NAA50Q9GZZ1 169 aaKnown RBP22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 ZNF286AQ9HBT8 521 aa22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 ZNRD1Q9P1U0 126 aa22.72■■□□□ 1.23
SMARCC1-203ENST00000454240 METTL21EPA6NDL7 271 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 C12orf77C9JDV5 145 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 HOXA3O43365 443 aaPredicted RBP22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 GABARAPO95166 117 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 NAPSAO96009 420 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 PAHP00439 452 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 NFYBP25208 207 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 VBP1P61758 197 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 UBA52P62987 128 aaKnown RBP22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 LDLRAD2Q5SZI1 272 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 TRAT1Q6PIZ9 186 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 GPR141Q7Z602 305 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 LHFPL4Q7Z7J7 247 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 BEND2Q8NDZ0 799 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 OR10R2Q8NGX6 335 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 LGALS14Q8TCE9 139 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 MEGF9Q9H1U4 602 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 AK3Q9UIJ7 227 aa22.71■■□□□ 1.23
SMARCC1-203ENST00000454240 FAM172BPA6NC97 362 aa22.7■■□□□ 1.22
SMARCC1-203ENST00000454240 TRIM77I1YAP6 450 aa22.7■■□□□ 1.22
SMARCC1-203ENST00000454240 IGLV1-47P01700 117 aa22.7■■□□□ 1.22
SMARCC1-203ENST00000454240 IER3P46695 156 aa22.7■■□□□ 1.22
SMARCC1-203ENST00000454240 CTF1Q16619 201 aa22.7■■□□□ 1.22
SMARCC1-203ENST00000454240 KRTAP24-1Q3LI83 254 aa22.7■■□□□ 1.22
SMARCC1-203ENST00000454240 GPR107Q5VW38 600 aa22.7■■□□□ 1.22
SMARCC1-203ENST00000454240 ZNF554Q86TJ5 538 aa22.7■■□□□ 1.22
SMARCC1-203ENST00000454240 RAB3CQ96E17 227 aa22.7■■□□□ 1.22
SMARCC1-203ENST00000454240 DUX5Q96PT3 197 aa22.7■■□□□ 1.22
SMARCC1-203ENST00000454240 KCNK7Q9Y2U2 307 aa22.7■■□□□ 1.22
SMARCC1-203ENST00000454240 F2RL2O00254 374 aa22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 LTC4SQ16873 150 aa22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 MINOS1Q5TGZ0 78 aa22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 ZNF880Q6PDB4 577 aa22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 TMEM86BQ8N661 226 aa22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 OR52M1Q8NGK5 317 aa22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 OR4P4Q8NGL7 312 aa22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 ZNF596Q8TC21 504 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms