RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 STRAPQ9Y3F4 350 aaKnown RBP13.51□□□□□ -0.25
SNX17-204ENST00000453453 HCFC1P51610 2035 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 CFAP46Q8IYW2 2715 aa13.51□□□□□ -0.25
SNX17-204ENST00000453453 PRR14LQ5THK1 2151 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 NRASP01111 189 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 CPT2P23786 658 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 RAB32Q13637 225 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 ANKRD55Q3KP44 614 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 OR52N4Q8NGI2 321 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 PIGCQ92535 297 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 PIGTQ969N2 578 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 MARS2Q96GW9 593 aaKnown RBP13.5□□□□□ -0.25
SNX17-204ENST00000453453 URM1Q9BTM9 101 aaKnown RBP13.5□□□□□ -0.25
SNX17-204ENST00000453453 PAPOLGQ9BWT3 736 aaKnown RBP13.5□□□□□ -0.25
SNX17-204ENST00000453453 TMPRSS5Q9H3S3 457 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 METTL8Q9H825 291 aaKnown RBP13.5□□□□□ -0.25
SNX17-204ENST00000453453 SLC7A11Q9UPY5 501 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 AP4M1O00189 453 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 GLAP06280 429 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 FBP1P09467 338 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 SEC11BP0C7V7 166 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 NAT2P11245 290 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 RPS2P15880 293 aaKnown RBP13.5□□□□□ -0.25
SNX17-204ENST00000453453 GRNP28799 593 aaKnown RBP13.5□□□□□ -0.25
SNX17-204ENST00000453453 CD80P33681 288 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 GLRXP35754 106 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 ZNF93P35789 620 aaPredicted RBP13.5□□□□□ -0.25
SNX17-204ENST00000453453 ERVS71-1P61550 626 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 BSPH1Q075Z2 132 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 TFF3Q07654 80 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 RPL7L1Q6DKI1 246 aaKnown RBP13.5□□□□□ -0.25
SNX17-204ENST00000453453 OR2T2Q6IF00 324 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 Q6ZRG5 221 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 LFNGQ8NES3 379 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 KLF14Q8TD94 323 aaPredicted RBP13.5□□□□□ -0.25
SNX17-204ENST00000453453 SPSB1Q96BD6 273 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 CLCC1Q96S66 551 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 RTBDNQ9BSG5 229 aaPredicted RBP13.5□□□□□ -0.25
SNX17-204ENST00000453453 NIT2Q9NQR4 276 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 GPR173Q9NS66 373 aa13.5□□□□□ -0.25
SNX17-204ENST00000453453 AMY2BP19961 511 aa13.49□□□□□ -0.25
SNX17-204ENST00000453453 RPL12P30050 165 aaKnown RBP13.49□□□□□ -0.25
SNX17-204ENST00000453453 SLC9A3R2Q15599 337 aa13.49□□□□□ -0.25
SNX17-204ENST00000453453 SLC22A6Q4U2R8 563 aa13.49□□□□□ -0.25
SNX17-204ENST00000453453 MBNL2Q5VZF2 373 aaKnown RBP13.49□□□□□ -0.25
SNX17-204ENST00000453453 PLCXD3Q63HM9 321 aa13.49□□□□□ -0.25
SNX17-204ENST00000453453 TMEM42Q69YG0 159 aa13.49□□□□□ -0.25
SNX17-204ENST00000453453 SLC22A25Q6T423 547 aa13.49□□□□□ -0.25
SNX17-204ENST00000453453 PNLDC1Q8NA58 520 aaKnown RBP13.49□□□□□ -0.25
SNX17-204ENST00000453453 BHLHE23Q8NDY6 225 aa13.49□□□□□ -0.25
SNX17-204ENST00000453453 LINC01560Q8TB33 94 aa13.49□□□□□ -0.25
SNX17-204ENST00000453453 HIST1H2AAQ96QV6 131 aa13.49□□□□□ -0.25
SNX17-204ENST00000453453 GPER1Q99527 375 aa13.49□□□□□ -0.25
SNX17-204ENST00000453453 NKX3-1Q99801 234 aaPredicted RBP13.49□□□□□ -0.25
SNX17-204ENST00000453453 OR2S2Q9NQN1 319 aa13.49□□□□□ -0.25
SNX17-204ENST00000453453 C14orf166Q9Y224 244 aaKnown RBP13.49□□□□□ -0.25
SNX17-204ENST00000453453 MRPS28Q9Y2Q9 187 aaKnown RBP13.49□□□□□ -0.25
SNX17-204ENST00000453453 DPRXA6NFQ7 191 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 K7EPK0 472 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 CDC14BO60729 498 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 ADAP1O75689 374 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 IGHV2-70P01814 119 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 PRF1P14222 555 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 RAB5AP20339 215 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 SNCAP37840 140 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 ALDH3B1P43353 468 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 PRDX4Q13162 271 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 UBE2V2Q15819 145 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 DNLZQ5SXM8 178 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 SLC16A13Q7RTY0 426 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 ZDHHC23Q8IYP9 409 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 OR5AS1Q8N127 324 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 FAM89BQ8N5H3 189 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 FAM71E2Q8N5Q1 922 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 NUP37Q8NFH4 326 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 OR13G1Q8NGZ3 307 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 OR10C1Q96KK4 312 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 C1orf147Q96MC9 270 aaPredicted RBP13.48□□□□□ -0.25
SNX17-204ENST00000453453 TMEM59Q9BXS4 323 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 RPS10P5Q9NQ39 176 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 MPC1Q9Y5U8 109 aa13.48□□□□□ -0.25
SNX17-204ENST00000453453 BORCS7-ASMTA0A0B4J1R7 106 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 C7orf77A4D0Y5 90 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 ZNF850A8MQ14 1090 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 VSTM5A8MXK1 200 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 IQCF6A8MYZ5 107 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 TIMM8AO60220 97 aaPredicted RBP13.47□□□□□ -0.25
SNX17-204ENST00000453453 DEDDO75618 318 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 TSPAN15O95858 294 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 IFNA2P01563 188 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 IFNA17P01571 189 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 CD3EP07766 207 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 RBMXP38159 391 aaKnown RBP13.47□□□□□ -0.25
SNX17-204ENST00000453453 MPV17P39210 176 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 NPY4RP50391 375 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 PPT1P50897 306 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 FABP6P51161 128 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 SELENOVP59797 346 aa13.47□□□□□ -0.25
SNX17-204ENST00000453453 NKX6-1P78426 367 aaPredicted RBP13.47□□□□□ -0.25
SNX17-204ENST00000453453 FABP9Q0Z7S8 132 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms