RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 A0A1W2PRD5 423 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 A0A1W2PRF3 423 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 A0A1W2PRM7 423 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 SPINT2O43291 252 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 CD3GP09693 182 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 GNB3P16520 340 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 OMGP23515 440 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 NFYBP25208 207 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 LGALS4P56470 323 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 PRB3Q04118 309 aaPredicted RBP11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 DYNC1I2Q13409 638 aaKnown RBP11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 SPCS2Q15005 226 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 CDNFQ49AH0 187 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 PRAMEF5Q5TYX0 476 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 RUSC1-AS1Q66K80 236 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 C9orf139Q6ZV77 190 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 RFESDQ8TAC1 157 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 SETD6Q8TBK2 473 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 MRPL30Q8TCC3 161 aaKnown RBP11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 C22orf15Q8WYQ4 148 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 ISOC1Q96CN7 298 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 S100A16Q96FQ6 103 aaKnown RBP11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 TMEM133Q9H2Q1 129 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 COMMD3Q9UBI1 195 aa11.94□□□□□ -0.5
NCKIPSD-207ENST00000453349 F8P00451 2351 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 A0A0A6YYH2 397 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 A6NJ64 397 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 POM121CA8CG34 1229 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 SERPINE3A8MV23 424 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 NPIPB11E5RHQ5 1161 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 NPFFO15130 113 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 MMP23AO75900 390 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 HIST1H1DP16402 221 aaKnown RBP11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 RCC1P18754 421 aaPredicted RBP11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 COX7A1P24310 79 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 PRRX1P54821 245 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 ARFRP1Q13795 201 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 LTC4SQ16873 150 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 UBE2NLQ5JXB2 153 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 HCP5Q6MZN7 132 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 RBMS3Q6XE24 437 aaKnown RBP11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 RTN4RL2Q86UN3 420 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 ABHD12Q8N2K0 398 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 SAMD12Q8N8I0 201 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 ZNF418Q8TF45 676 aaPredicted RBP11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 CMTM3Q96MX0 182 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 SUCNR1Q9BXA5 334 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 CLEC7AQ9BXN2 247 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 ABCG5Q9H222 651 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 LINC00574Q9H8X3 128 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 ZMAT3Q9HA38 289 aaKnown RBP11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 MBNL3Q9NUK0 354 aaKnown RBP11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 MGAT4AQ9UM21 535 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 FAM96BQ9Y3D0 163 aa11.93□□□□□ -0.5
NCKIPSD-207ENST00000453349 MEIOCA2RUB1 952 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 H3BMQ9 156 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 TOR1AO14656 332 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 NAPSAO96009 420 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 ARG1P05089 322 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 SSTR5P35346 364 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 TALDO1P37837 337 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 MIDNQ504T8 468 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 ZNF554Q86TJ5 538 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 BCL6BQ8N143 479 aaPredicted RBP11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 PRR18Q8N4B5 295 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 OR11H6Q8NGC7 330 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 SLC25A38Q96DW6 304 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 KIRREL1Q96J84 757 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 CYYR1Q96J86 154 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 TAF9BQ9HBM6 251 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 C12orf4Q9NQ89 552 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 RSL24D1Q9UHA3 163 aaKnown RBP11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 KCNK7Q9Y2U2 307 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 ACANP16112 2415 aa11.92□□□□□ -0.5
NCKIPSD-207ENST00000453349 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.92□□□□□ -0.52e-7■■■□□ 18.1
NCKIPSD-207ENST00000453349 TRAV18A0A075B6X5 111 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 TRBV6-6A0A0A6YYG2 114 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 IGHV2-26A0A0B4J1V2 119 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 SMIM31A0A1B0GVY4 71 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 C12orf77C9JDV5 145 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 C15orf65H3BRN8 121 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 SDCBPO00560 298 aaPredicted RBP11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 MFNGO00587 321 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 GSTP1P09211 210 aaKnown RBP11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 GDNFP39905 211 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 PITPNAQ00169 270 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 ZNF260Q3ZCT1 412 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 OLFML2AQ68BL7 652 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 MOB1BQ7L9L4 216 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 OR52M1Q8NGK5 317 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 ZNF596Q8TC21 504 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 ZDHHC16Q969W1 377 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 GALMQ96C23 342 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 SLC6A7Q99884 636 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 HDHD3Q9BSH5 251 aaPredicted RBP11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 NDUFA13Q9P0J0 144 aa11.91□□□□□ -0.5
NCKIPSD-207ENST00000453349 A0A087X0M5 115 aa11.9□□□□□ -0.5
NCKIPSD-207ENST00000453349 A0A0A6YYJ9 748 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms