RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ASCL1P50553 236 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 AKR1C2P52895 323 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 ERVK11-1P61568 191 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 HLA-DRB3P79483 266 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 AKR1C1Q04828 323 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 FAM180AQ6UWF9 173 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 LDLRAD3Q86YD5 345 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 C18orf12Q96KH6 178 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 AQP10Q96PS8 301 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 SHARPINQ9H0F6 387 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 MAGT1Q9H0U3 335 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 KCNS2Q9ULS6 477 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 TP53TG5Q9Y2B4 290 aa9.96□□□□□ -0.81
VTA1-203ENST00000452973 TLN1Q9Y490 2541 aaKnown RBP9.96□□□□□ -0.81
VTA1-203ENST00000452973 PROB1E7EW31 1015 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 ARHGDIBP52566 201 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 AESQ08117 197 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 Q8IYB0 196 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 SCNM1Q9BWG6 230 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 COL25A1Q9BXS0 654 aaPredicted RBP9.96□□□□□ -0.82
VTA1-203ENST00000452973 BCL2L14Q9BZR8 327 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 PARP12Q9H0J9 701 aaKnown RBP9.96□□□□□ -0.82
VTA1-203ENST00000452973 TMEM222Q9H0R3 208 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 TUBD1Q9UJT1 453 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 PPP1R3CQ9UQK1 317 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 IGF2RP11717 2491 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 CRYZL1O95825 349 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 CRYABP02511 175 aaKnown RBP9.96□□□□□ -0.82
VTA1-203ENST00000452973 CTXN2P0C2S0 81 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 TMEM33P57088 247 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 FAM27E3Q08E93 113 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 TUSC1Q2TAM9 212 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 C1orf185Q5T7R7 199 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 FAM53AQ6NSI3 398 aaPredicted RBP9.96□□□□□ -0.82
VTA1-203ENST00000452973 OR1S2Q8NGQ3 325 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 BSCL2Q96G97 398 aaPredicted RBP9.96□□□□□ -0.82
VTA1-203ENST00000452973 USB1Q9BQ65 265 aaKnown RBP9.96□□□□□ -0.82
VTA1-203ENST00000452973 SLC25A15Q9Y619 301 aa9.96□□□□□ -0.82
VTA1-203ENST00000452973 NBASA2RRP1 2371 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 SMG1Q96Q15 3661 aaKnown RBP9.95□□□□□ -0.82
VTA1-203ENST00000452973 OR8U9P0C7N5 309 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 LYL1P12980 280 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 EPHA1P21709 976 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 Q6ZS49 121 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 STPG2Q8N412 459 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 OR4A4PQ8NGN8 299 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 OR8U1Q8NH10 309 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 ERGIC1Q969X5 290 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 PHYHIPLQ96FC7 376 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 TAF9BQ9HBM6 251 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 FBXL17Q9UF56 701 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 PCDHB10Q9UN67 800 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 OR2W1Q9Y3N9 320 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 ZSCAN5BA6NJL1 495 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 H7C1Q1 480 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 ADAM20O43506 726 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 KCNJ3P48549 501 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 NAAAQ02083 359 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 IZUMO4Q1ZYL8 232 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 C11orf53Q8IXP5 236 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 BVESQ8NE79 360 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 ANGPTL6Q8NI99 470 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 MUCL1Q96DR8 90 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 CXXC4Q9H2H0 198 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 TAAR3PQ9P1P4 343 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 DNAJB11Q9UBS4 358 aa9.95□□□□□ -0.82
VTA1-203ENST00000452973 A0A1B0GW55 424 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 ZNF705EA8MWA4 302 aaPredicted RBP9.94□□□□□ -0.82
VTA1-203ENST00000452973 TUSC2O75896 110 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 DUX4L2P0CJ85 424 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 DUX4L3P0CJ86 424 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 DUX4L4P0CJ87 422 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 DUX4L5P0CJ88 424 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 DUX4L6P0CJ89 424 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 DUX4L7P0CJ90 424 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 GABRA2P47869 451 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 MSMPQ1L6U9 139 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 ZNF324BQ6AW86 544 aaPredicted RBP9.94□□□□□ -0.82
VTA1-203ENST00000452973 FIP1L1Q6UN15 594 aaKnown RBP9.94□□□□□ -0.82
VTA1-203ENST00000452973 ZNF497Q6ZNH5 498 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 MS4A7Q9GZW8 240 aaPredicted RBP9.94□□□□□ -0.82
VTA1-203ENST00000452973 DUX4Q9UBX2 424 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 RNF150Q9ULK6 438 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 RCL1Q9Y2P8 373 aaKnown RBP9.94□□□□□ -0.82
VTA1-203ENST00000452973 SPTBN4Q9H254 2564 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 ST8SIA3O43173 380 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 PGLYRP1O75594 196 aaPredicted RBP9.94□□□□□ -0.82
VTA1-203ENST00000452973 PTBP3O95758 552 aaKnown RBP9.94□□□□□ -0.82
VTA1-203ENST00000452973 IGLV1-44P01699 117 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 GLAP06280 429 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 OMGP23515 440 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 CEACAM6P40199 344 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 POLR2GP62487 172 aaKnown RBP eCLIP9.94□□□□□ -0.82
VTA1-203ENST00000452973 NHLH2Q02577 135 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 ZNF146Q15072 292 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 WDR82Q6UXN9 313 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 C22orf34Q6ZV56 151 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 RNASE11Q8TAA1 199 aaKnown RBP9.94□□□□□ -0.82
VTA1-203ENST00000452973 METRNQ9UJH8 293 aa9.94□□□□□ -0.82
VTA1-203ENST00000452973 TMED3Q9Y3Q3 217 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms