RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TRAPPC6BQ86SZ2 158 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 SIGLECL1Q8N7X8 197 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 OR6M1Q8NGM8 313 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 OR13D1Q8NGV5 346 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 KCNG3Q8TAE7 436 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 TNFRSF14Q92956 283 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 MARVELD1Q9BSK0 173 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 SELENOIQ9C0D9 397 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 PPA2Q9H2U2 334 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 GAL3ST2Q9H3Q3 398 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 ING3Q9NXR8 418 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 TAS2R3Q9NYW6 316 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 OR6C3Q9NZP0 311 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 AK6Q9Y3D8 172 aaKnown RBP7.28□□□□□ -1.24
COL8A1-203ENST00000452013 V9GY05 133 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 TANC2Q9HCD6 1990 aa7.28□□□□□ -1.24
COL8A1-203ENST00000452013 MEIKINA0A087WXM9 373 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 FAM240BA0A1B0GVZ2 78 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 ODAMA1E959 279 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 RNF212BA8MTL3 300 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 RNASEK-C17orf49H0YIS7 233 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 SLC17A2O00624 439 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 NPFFO15130 113 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 LYRM1O43325 122 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 VENTXO95231 258 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 ARSBP15848 533 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 MGMTP16455 207 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 GZMHP20718 246 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 GLIPR1P48060 266 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 LGALS4P56470 323 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 SCAND1P57086 179 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 MRPS15P82914 257 aaKnown RBP7.27□□□□□ -1.25
COL8A1-203ENST00000452013 IL18Q14116 193 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 ZNF273Q14593 569 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 CDK10Q15131 360 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 TUSC1Q2TAM9 212 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 DEFB112Q30KQ8 113 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 MIDNQ504T8 468 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 RUSC1-AS1Q66K80 236 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 SLC35E4Q6ICL7 350 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 OR52W1Q6IF63 320 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 NOXA1Q86UR1 476 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 PDZD9Q8IXQ8 264 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 C11orf42Q8N5U0 333 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 TPRX1Q8N7U7 411 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 SUMF2Q8NBJ7 301 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 NEK7Q8TDX7 302 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 ST6GAL2Q96JF0 529 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 DPCDQ9BVM2 203 aaPredicted RBP7.27□□□□□ -1.25
COL8A1-203ENST00000452013 C11orf54Q9H0W9 315 aaPredicted RBP7.27□□□□□ -1.25
COL8A1-203ENST00000452013 PRDM13Q9H4Q3 707 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 BANF2Q9H503 90 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 ZMAT3Q9HA38 289 aaKnown RBP7.27□□□□□ -1.25
COL8A1-203ENST00000452013 COMMD3Q9UBI1 195 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 CSPG4Q6UVK1 2322 aa7.27□□□□□ -1.25
COL8A1-203ENST00000452013 A0A1W2PP11 408 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 A0A1W2PRD5 423 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 A0A1W2PRF3 423 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 A0A1W2PRM7 423 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 TMEM30CPA0ZSE6 113 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 ZNF729A6NN14 1252 aaPredicted RBP7.26□□□□□ -1.25
COL8A1-203ENST00000452013 HSPB6O14558 160 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 CTDSPLO15194 276 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 PLA2G10O15496 165 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 CA11O75493 328 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 MPIG6BO95866 241 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 DHFRP00374 187 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 PAHP00439 452 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 FBP1P09467 338 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 GSTT2P0CG29 244 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 GSTT2BP0CG30 244 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 IGHV1-8P0DP01 117 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 FUT3P21217 361 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 DLX6P56179 175 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 MRPS10P82664 201 aaKnown RBP7.26□□□□□ -1.25
COL8A1-203ENST00000452013 PAX5Q02548 391 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 ATXN7L3Q14CW9 347 aaPredicted RBP7.26□□□□□ -1.25
COL8A1-203ENST00000452013 FAM189A2Q15884 450 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 RAB11BQ15907 218 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 Q6YL49 198 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 OR2W3Q7Z3T1 314 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 TMEM104Q8NE00 496 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 C1orf147Q96MC9 270 aaPredicted RBP7.26□□□□□ -1.25
COL8A1-203ENST00000452013 ZNF48Q96MX3 618 aaPredicted RBP7.26□□□□□ -1.25
COL8A1-203ENST00000452013 NEDD4LQ96PU5 975 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 URM1Q9BTM9 101 aaKnown RBP7.26□□□□□ -1.25
COL8A1-203ENST00000452013 DPAGT1Q9H3H5 408 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 SOX21Q9Y651 276 aaPredicted RBP7.26□□□□□ -1.25
COL8A1-203ENST00000452013 SESN1Q9Y6P5 492 aa7.26□□□□□ -1.25
COL8A1-203ENST00000452013 TEP1Q99973 2627 aaKnown RBP7.26□□□□□ -1.25
COL8A1-203ENST00000452013 ANK3Q12955 4377 aaKnown RBP7.25□□□□□ -1.25
COL8A1-203ENST00000452013 A0A0U1RQK1 487 aa7.25□□□□□ -1.25
COL8A1-203ENST00000452013 KBTBD11-OT1A0A1B0GTJ5 212 aa7.25□□□□□ -1.25
COL8A1-203ENST00000452013 NAP1L6A6NFF2 107 aa7.25□□□□□ -1.25
COL8A1-203ENST00000452013 NOTOA8MTQ0 251 aa7.25□□□□□ -1.25
COL8A1-203ENST00000452013 CLDN34H7C241 214 aa7.25□□□□□ -1.25
COL8A1-203ENST00000452013 GSTZ1O43708 216 aaPredicted RBP7.25□□□□□ -1.25
COL8A1-203ENST00000452013 HPGDSO60760 199 aa7.25□□□□□ -1.25
COL8A1-203ENST00000452013 C1QBP02746 253 aa7.25□□□□□ -1.25
COL8A1-203ENST00000452013 CLEC2LP0C7M8 214 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms