RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 OR10S1Q8NGN2 331 aa10.77□□□□□ -0.69
UBE3B-204ENST00000449510 FLVCR1-AS1Q8TAF5 88 aa10.77□□□□□ -0.69
UBE3B-204ENST00000449510 VAMP8Q9BV40 100 aa10.77□□□□□ -0.69
UBE3B-204ENST00000449510 GNG12Q9UBI6 72 aa10.77□□□□□ -0.69
UBE3B-204ENST00000449510 MMP17Q9ULZ9 603 aa10.77□□□□□ -0.69
UBE3B-204ENST00000449510 HTTP42858 3142 aa10.77□□□□□ -0.69
UBE3B-204ENST00000449510 ELOBQ15370 118 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 LHFPL2Q6ZUX7 228 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 ST6GALNAC3Q8NDV1 305 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 OR10G4Q8NGN3 311 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 OR10G9Q8NGN4 311 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 OR10G7Q8NGN6 311 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 MRPL30Q8TCC3 161 aaKnown RBP10.76□□□□□ -0.69
UBE3B-204ENST00000449510 TUBA4BQ9H853 241 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 RNF24Q9Y225 148 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 IGHV3-43A0A0B4J1X8 118 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 WIPF3A6NGB9 483 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 ST8SIA5O15466 376 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 TSPAN2O60636 221 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 SRP19P09132 144 aaKnown RBP10.76□□□□□ -0.69
UBE3B-204ENST00000449510 IGHV3-43DP0DP04 118 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 TMEM187Q14656 261 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 MSMO1Q15800 293 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 SIGLECL1Q8N7X8 197 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 MARS2Q96GW9 593 aaKnown RBP10.76□□□□□ -0.69
UBE3B-204ENST00000449510 CHST5Q9GZS9 411 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 BCAT2O15382 392 aaPredicted RBP10.76□□□□□ -0.69
UBE3B-204ENST00000449510 SYNGR2O43760 224 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 BCL2P10415 239 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 DTYMKP23919 212 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 HOXC12P31275 282 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 WNT5AP41221 380 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 SHHQ15465 462 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 LINC00696Q6ZRV3 163 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 OR10V1Q8NGI7 309 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 M1APQ8TC57 530 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 SPSB1Q96BD6 273 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 SPACA9Q96E40 222 aaPredicted RBP10.76□□□□□ -0.69
UBE3B-204ENST00000449510 VPS25Q9BRG1 176 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 MTCH1Q9NZJ7 389 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 STARD10Q9Y365 291 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 CBY1Q9Y3M2 126 aa10.76□□□□□ -0.69
UBE3B-204ENST00000449510 A6NNC1 897 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 ZNF814B7Z6K7 855 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 GLIPR1P48060 266 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 PPP1CBP62140 327 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 VAMP3Q15836 100 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 BTNL3Q6UXE8 466 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 FOXB1Q99853 325 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 CLCF1Q9UBD9 225 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 ALPK3Q96L96 1907 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 TRDCB7Z8K6 153 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 IGHV2-70P01814 119 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 BCL3P20749 454 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 COL10A1Q03692 680 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 H2BFWTQ7Z2G1 175 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 OR1P1Q8NH06 330 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 MUCL1Q96DR8 90 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 ACTR3CQ9C0K3 210 aaPredicted RBP10.75□□□□□ -0.69
UBE3B-204ENST00000449510 VCANP13611 3396 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 F6UZH7 168 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 ZIC3O60481 467 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 SSR4P51571 173 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 FUT6P51993 359 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 KIAA1644Q3SXP7 199 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 PRR27Q6MZM9 219 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 FAM58AQ8N1B3 248 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 OR6X1Q8NH79 312 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 BOD1Q96IK1 185 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 OBP2AQ9NY56 170 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 GOLT1BQ9Y3E0 138 aa10.75□□□□□ -0.69
UBE3B-204ENST00000449510 PLXNA4Q9HCM2 1894 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 FCN1O00602 326 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 COX5AP20674 150 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 CEACAM6P40199 344 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 PCBD1P61457 104 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 ERASQ7Z444 233 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 CLDN23Q96B33 292 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 CLN8Q9UBY8 286 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 VAX2Q9UIW0 290 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 ZSWIM8A7E2V4 1837 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 IGHV1OR21-1A0A087WYE8 117 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 CER1O95813 267 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 EFEMP2O95967 443 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 IGHV4-34P06331 123 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 ZNF17P17021 662 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 CA6P23280 308 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 MDH2P40926 338 aaKnown RBP10.74□□□□□ -0.69
UBE3B-204ENST00000449510 UNQ6494/PRO21346Q6UXR6 183 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 SSX7Q7RTT5 188 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 LURAP1LQ8IV03 231 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 ZNF784Q8NCA9 323 aaPredicted RBP10.74□□□□□ -0.69
UBE3B-204ENST00000449510 SGMS2Q8NHU3 365 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 MTCH2Q9Y6C9 303 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 A6NCN8 305 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 LRRC3CA6NJW4 275 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 AMTP48728 403 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 PTTG1IPP53801 180 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 ERVFC1-1P60608 527 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 P2RY6Q15077 328 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms