RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 SPCS3P61009 180 aa11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 SYT8Q8NBV8 401 aa11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 OR5A2Q8NGI9 324 aa11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 TGIF2Q9GZN2 237 aa11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 HIGD1AQ9Y241 93 aa11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 SNRPCP09234 159 aaKnown RBP11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 PSG6Q00889 435 aa11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 ACSF3Q4G176 576 aaPredicted RBP11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 ARRDC1Q8N5I2 433 aa11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 SNRNP40Q96DI7 357 aaKnown RBP11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 PACRGQ96M98 296 aaPredicted RBP11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 A0A1B0GVG6 124 aa11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 RAB29O14966 203 aa11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 USF1P22415 310 aaPredicted RBP11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 GVQW1Q8N7I0 195 aa11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 TECRQ9NZ01 308 aaKnown RBP11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 NPAP1Q9NZP6 1156 aa11.12□□□□□ -0.63
AC006001.3-201ENST00000449307 RGPD3A6NKT7 1758 aaPredicted RBP11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 BTG1P62324 171 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 TMEM88Q6PEY1 159 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 RELL2Q8NC24 303 aaPredicted RBP11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 TMEM140Q9NV12 185 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 IL20Q9NYY1 176 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 BOLA1Q9Y3E2 137 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 PYCARD-AS1I3L0S3 204 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 J3QR06 171 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 SMAGPQ0VAQ4 97 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 GABRA6Q16445 453 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 FAM78BQ5VT40 261 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 DEGS2Q6QHC5 323 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 ATG4DQ86TL0 474 aaPredicted RBP11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 TMEM105Q8N8V8 129 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 BVESQ8NE79 360 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 MOB4Q9Y3A3 225 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 ADAMTSL1Q8N6G6 1762 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 TCRBV5S2A0A599 114 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 DYNLT3P51808 116 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 DEFA6Q01524 100 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 HCP5Q6MZN7 132 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 GLDNQ6ZMI3 551 aaPredicted RBP11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 FAM210BQ96KR6 192 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 MIEN1Q9BRT3 115 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 KNL1Q8NG31 2342 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 INSL4Q14641 139 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 RBPMSQ93062 196 aaKnown RBP11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 CRISP2P16562 243 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 HLA-DRB3P79483 266 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 PLPPR5Q32ZL2 321 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 LINC00303Q3SY05 128 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 ZNF826PQ6ZT77 177 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 OR5H6Q8NGV6 325 aa11.11□□□□□ -0.63
AC006001.3-201ENST00000449307 KIAA1324LA8MWY0 1029 aaPredicted RBP11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 COL22A1Q8NFW1 1626 aaPredicted RBP11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 COL8A1P27658 744 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 MMP15P51511 669 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 GAPTQ8N292 157 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 ZBTB44Q8NCP5 570 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 SOSTQ9BQB4 213 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 ZFPL1O95159 310 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 IL11P20809 199 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 MEOX2P50222 304 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 SULT1A1P50225 295 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 CLEC9AQ6UXN8 241 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 C2CD4CQ8TF44 421 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 NXF2Q9GZY0 626 aaKnown RBP11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 SLC52A3Q9NQ40 469 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 ABCA3Q99758 1704 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 DHRS7CA6NNS2 312 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 SIAH2O43255 324 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 P01737 135 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 FAM122BQ7Z309 247 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 C1orf162Q8NEQ5 155 aaPredicted RBP11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 WDR89Q96FK6 387 aaPredicted RBP11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 FOXS1O43638 330 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 CPN1P15169 458 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 GP2P55259 537 aaKnown RBP11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 HERVK_113P61574 105 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 SSBP1Q04837 148 aaKnown RBP11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 ELOVL5Q9NYP7 299 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 PRR13Q9NZ81 148 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 GABRB1P18505 474 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 NFAM1Q8NET5 270 aaPredicted RBP11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 RPS4Y2Q8TD47 263 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 TLNRD1Q9H1K6 362 aa11.1□□□□□ -0.63
AC006001.3-201ENST00000449307 A0A1W2PNV4 684 aa11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 RGS13O14921 159 aa11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 PDZK1IP1Q13113 114 aa11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 ITLN2Q8WWU7 325 aaPredicted RBP11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 SRD5A3Q9H8P0 318 aa11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 CCL28Q9NRJ3 127 aa11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 MESP2Q0VG99 397 aa11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 TWIST1Q15672 202 aa11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 VWA1Q6PCB0 445 aa11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 OR4X2Q8NGF9 303 aa11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 JMJD8Q96S16 334 aa11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 NKX6-2Q9C056 277 aaPredicted RBP11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 FOXD3Q9UJU5 478 aaPredicted RBP11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 MAP1LC3B2A6NCE7 125 aa11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 RPL27AP46776 148 aaKnown RBP11.09□□□□□ -0.63
AC006001.3-201ENST00000449307 TMEM78Q5T7P6 136 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms