RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 WBP4O75554 376 aaKnown RBP22.32■■□□□ 1.16
CBX4-202ENST00000448310 CSTBP04080 98 aaKnown RBP22.32■■□□□ 1.16
CBX4-202ENST00000448310 ZNF93P35789 620 aaPredicted RBP22.32■■□□□ 1.16
CBX4-202ENST00000448310 VAX1Q5SQQ9 334 aa22.32■■□□□ 1.16
CBX4-202ENST00000448310 OR13C5Q8NGS8 318 aa22.32■■□□□ 1.16
CBX4-202ENST00000448310 CCDC107Q8WV48 283 aa22.32■■□□□ 1.16
CBX4-202ENST00000448310 IFT22Q9H7X7 185 aa22.32■■□□□ 1.16
CBX4-202ENST00000448310 TMEM138Q9NPI0 162 aa22.32■■□□□ 1.16
CBX4-202ENST00000448310 IL36GQ9NZH8 169 aa22.32■■□□□ 1.16
CBX4-202ENST00000448310 IGHV1-3A0A0C4DH29 117 aa22.31■■□□□ 1.16
CBX4-202ENST00000448310 A0A1W2PP11 408 aa22.31■■□□□ 1.16
CBX4-202ENST00000448310 TMEM30CPA0ZSE6 113 aa22.31■■□□□ 1.16
CBX4-202ENST00000448310 CCRL2O00421 344 aa22.31■■□□□ 1.16
CBX4-202ENST00000448310 IGHG2P01859 326 aa22.31■■□□□ 1.16
CBX4-202ENST00000448310 PPP3R1P63098 170 aa22.31■■□□□ 1.16
CBX4-202ENST00000448310 ZNF816Q0VGE8 651 aaPredicted RBP22.31■■□□□ 1.16
CBX4-202ENST00000448310 NHLRC3Q5JS37 347 aa22.31■■□□□ 1.16
CBX4-202ENST00000448310 ATAD3CQ5T2N8 411 aa22.31■■□□□ 1.16
CBX4-202ENST00000448310 KLHL30-AS1Q8NEE0 82 aa22.31■■□□□ 1.16
CBX4-202ENST00000448310 ARL11Q969Q4 196 aa22.31■■□□□ 1.16
CBX4-202ENST00000448310 IGHV3-43A0A0B4J1X8 118 aa22.3■■□□□ 1.16
CBX4-202ENST00000448310 C15orf65H3BRN8 121 aa22.3■■□□□ 1.16
CBX4-202ENST00000448310 GAPDHP04406 335 aaKnown RBP22.3■■□□□ 1.16
CBX4-202ENST00000448310 IGHV3-43DP0DP04 118 aa22.3■■□□□ 1.16
CBX4-202ENST00000448310 BDKRB2P30411 391 aa22.3■■□□□ 1.16
CBX4-202ENST00000448310 CCDC58Q4VC31 144 aa22.3■■□□□ 1.16
CBX4-202ENST00000448310 STPG2Q8N412 459 aa22.3■■□□□ 1.16
CBX4-202ENST00000448310 DPF1Q92782 380 aa22.3■■□□□ 1.16
CBX4-202ENST00000448310 EAF1Q96JC9 268 aaPredicted RBP22.3■■□□□ 1.16
CBX4-202ENST00000448310 DUX3Q96PT4 197 aa22.3■■□□□ 1.16
CBX4-202ENST00000448310 S100A14Q9HCY8 104 aa22.3■■□□□ 1.16
CBX4-202ENST00000448310 SDCBPO00560 298 aaPredicted RBP22.29■■□□□ 1.16
CBX4-202ENST00000448310 GZMHP20718 246 aa22.29■■□□□ 1.16
CBX4-202ENST00000448310 SLC35B1P78383 322 aa22.29■■□□□ 1.16
CBX4-202ENST00000448310 EBI3Q14213 229 aa22.29■■□□□ 1.16
CBX4-202ENST00000448310 FOXRED2Q8IWF2 684 aa22.29■■□□□ 1.16
CBX4-202ENST00000448310 PQLC1Q8N2U9 271 aa22.29■■□□□ 1.16
CBX4-202ENST00000448310 NEK7Q8TDX7 302 aa22.29■■□□□ 1.16
CBX4-202ENST00000448310 S100A13Q99584 98 aa22.29■■□□□ 1.16
CBX4-202ENST00000448310 ZFP57Q9NU63 452 aa22.29■■□□□ 1.16
CBX4-202ENST00000448310 MAGEA13PA6NCF6 341 aa22.28■■□□□ 1.16
CBX4-202ENST00000448310 NCBP2LA6PVI3 153 aaKnown RBP22.28■■□□□ 1.16
CBX4-202ENST00000448310 LALBAP00709 142 aa22.28■■□□□ 1.16
CBX4-202ENST00000448310 SLC22A6Q4U2R8 563 aa22.28■■□□□ 1.16
CBX4-202ENST00000448310 TMPRSS11AQ6ZMR5 421 aa22.28■■□□□ 1.16
CBX4-202ENST00000448310 RBMXL1Q96E39 390 aaKnown RBP22.28■■□□□ 1.16
CBX4-202ENST00000448310 GPR61Q9BZJ8 451 aa22.28■■□□□ 1.16
CBX4-202ENST00000448310 GFOD1Q9NXC2 390 aa22.28■■□□□ 1.16
CBX4-202ENST00000448310 KMT2CQ8NEZ4 4911 aaKnown RBP22.28■■□□□ 1.16
CBX4-202ENST00000448310 NBEAL2Q6ZNJ1 2754 aa22.27■■□□□ 1.16
CBX4-202ENST00000448310 DCKP27707 260 aa22.27■■□□□ 1.16
CBX4-202ENST00000448310 MYCNOSP40205 109 aa22.27■■□□□ 1.16
CBX4-202ENST00000448310 IZUMO1Q8IYV9 350 aa22.27■■□□□ 1.16
CBX4-202ENST00000448310 Q8N6K4 173 aa22.27■■□□□ 1.16
CBX4-202ENST00000448310 SMIM19Q96E16 107 aa22.27■■□□□ 1.16
CBX4-202ENST00000448310 P2RX4Q99571 388 aa22.27■■□□□ 1.16
CBX4-202ENST00000448310 ZNF184Q99676 751 aaPredicted RBP22.27■■□□□ 1.16
CBX4-202ENST00000448310 OGG1O15527 345 aa22.26■■□□□ 1.15
CBX4-202ENST00000448310 GPR12P47775 334 aa22.26■■□□□ 1.15
CBX4-202ENST00000448310 RIPK1Q13546 671 aa22.26■■□□□ 1.15
CBX4-202ENST00000448310 MPV17LQ2QL34 196 aa22.26■■□□□ 1.15
CBX4-202ENST00000448310 LINC00596Q86U02 117 aa22.26■■□□□ 1.15
CBX4-202ENST00000448310 TGIF2LXQ8IUE1 241 aa22.26■■□□□ 1.15
CBX4-202ENST00000448310 C10orf67Q8IYJ2 551 aa22.26■■□□□ 1.15
CBX4-202ENST00000448310 LINC00311Q8N616 119 aa22.26■■□□□ 1.15
CBX4-202ENST00000448310 OR52M1Q8NGK5 317 aa22.26■■□□□ 1.15
CBX4-202ENST00000448310 PAK1IP1Q9NWT1 392 aaPredicted RBP22.26■■□□□ 1.15
CBX4-202ENST00000448310 CLEC2DQ9UHP7 191 aa22.26■■□□□ 1.15
CBX4-202ENST00000448310 AIPO00170 330 aa22.25■■□□□ 1.15
CBX4-202ENST00000448310 SLC31A2O15432 143 aa22.25■■□□□ 1.15
CBX4-202ENST00000448310 MT-ND4P03905 459 aa22.25■■□□□ 1.15
CBX4-202ENST00000448310 IGFBP3P17936 291 aaPredicted RBP22.25■■□□□ 1.15
CBX4-202ENST00000448310 ZNF497Q6ZNH5 498 aa22.25■■□□□ 1.15
CBX4-202ENST00000448310 LCNL1Q6ZST4 164 aa22.25■■□□□ 1.15
CBX4-202ENST00000448310 ZNF695Q8IW36 515 aa22.25■■□□□ 1.15
CBX4-202ENST00000448310 COMMD1Q8N668 190 aa22.25■■□□□ 1.15
CBX4-202ENST00000448310 ZFP41Q8N8Y5 198 aa22.25■■□□□ 1.15
CBX4-202ENST00000448310 Q8N9W7 124 aa22.25■■□□□ 1.15
CBX4-202ENST00000448310 ZNF555Q8NEP9 628 aa22.25■■□□□ 1.15
CBX4-202ENST00000448310 OR2T10Q8NGZ9 312 aa22.25■■□□□ 1.15
CBX4-202ENST00000448310 RTN4IP1Q8WWV3 396 aaPredicted RBP22.25■■□□□ 1.15
CBX4-202ENST00000448310 BABAM2Q9NXR7 383 aa22.25■■□□□ 1.15
CBX4-202ENST00000448310 ZNF736B4DX44 427 aaPredicted RBP22.24■■□□□ 1.15
CBX4-202ENST00000448310 ORC5O43913 435 aa22.24■■□□□ 1.15
CBX4-202ENST00000448310 GTF2F2P13984 249 aa22.24■■□□□ 1.15
CBX4-202ENST00000448310 SLC6A1P30531 599 aa22.24■■□□□ 1.15
CBX4-202ENST00000448310 TMEM104Q8NE00 496 aa22.24■■□□□ 1.15
CBX4-202ENST00000448310 GHSRQ92847 366 aa22.24■■□□□ 1.15
CBX4-202ENST00000448310 ST6GALNAC6Q969X2 333 aa22.24■■□□□ 1.15
CBX4-202ENST00000448310 MCRIP2Q9BUT9 160 aaKnown RBP22.24■■□□□ 1.15
CBX4-202ENST00000448310 ABCG5Q9H222 651 aa22.24■■□□□ 1.15
CBX4-202ENST00000448310 LIN7CQ9NUP9 197 aaKnown RBP22.24■■□□□ 1.15
CBX4-202ENST00000448310 SMPD3Q9NY59 655 aaPredicted RBP22.24■■□□□ 1.15
CBX4-202ENST00000448310 TRAV8-7A0A075B6U6 113 aa22.23■■□□□ 1.15
CBX4-202ENST00000448310 TRBV5-5A0A0J9YX44 114 aa22.23■■□□□ 1.15
CBX4-202ENST00000448310 AP4M1O00189 453 aa22.23■■□□□ 1.15
CBX4-202ENST00000448310 ZNF780AO75290 641 aaPredicted RBP22.23■■□□□ 1.15
CBX4-202ENST00000448310 RPLP1P05386 114 aaKnown RBP22.23■■□□□ 1.15
CBX4-202ENST00000448310 RAB25P57735 213 aa22.23■■□□□ 1.15
CBX4-202ENST00000448310 CD69Q07108 199 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms