RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 OR4C5Q8NGB2 326 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 SLC46A1Q96NT5 459 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 RNF2Q99496 336 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 SLC2A9Q9NRM0 540 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 ZNF701Q9NV72 531 aaPredicted RBP16.59■□□□□ 0.25
HMGA1-205ENST00000447654 RNF115Q9Y4L5 304 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 TMEM131Q92545 1883 aa16.59■□□□□ 0.25
HMGA1-205ENST00000447654 AQP7O14520 342 aa16.58■□□□□ 0.25
HMGA1-205ENST00000447654 HLA-HP01893 362 aa16.58■□□□□ 0.25
HMGA1-205ENST00000447654 TDRG1Q3Y452 100 aa16.58■□□□□ 0.25
HMGA1-205ENST00000447654 FBLN7Q53RD9 439 aa16.58■□□□□ 0.25
HMGA1-205ENST00000447654 OGFOD3Q6PK18 319 aa16.58■□□□□ 0.25
HMGA1-205ENST00000447654 SLC38A9Q8NBW4 561 aa16.58■□□□□ 0.25
HMGA1-205ENST00000447654 REEP6Q96HR9 211 aa16.58■□□□□ 0.25
HMGA1-205ENST00000447654 MANBALQ9NQG1 85 aa16.58■□□□□ 0.25
HMGA1-205ENST00000447654 ST3GAL6Q9Y274 331 aa16.58■□□□□ 0.25
HMGA1-205ENST00000447654 CHD3Q12873 2000 aaKnown RBP16.58■□□□□ 0.24
HMGA1-205ENST00000447654 CBY3A6NI87 242 aa16.58■□□□□ 0.24
HMGA1-205ENST00000447654 AADACP22760 399 aa16.58■□□□□ 0.24
HMGA1-205ENST00000447654 SLC6A8P48029 635 aa16.58■□□□□ 0.24
HMGA1-205ENST00000447654 BLKP51451 505 aa16.58■□□□□ 0.24
HMGA1-205ENST00000447654 RUNX1Q01196 453 aa16.58■□□□□ 0.24
HMGA1-205ENST00000447654 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.58■□□□□ 0.24
HMGA1-205ENST00000447654 ZNF581Q9P0T4 197 aa16.58■□□□□ 0.24
HMGA1-205ENST00000447654 MRPS16Q9Y3D3 137 aaKnown RBP16.58■□□□□ 0.24
HMGA1-205ENST00000447654 C11orf98E9PRG8 122 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 DXOO77932 396 aaKnown RBP16.57■□□□□ 0.24
HMGA1-205ENST00000447654 SERF2P84101 59 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 PRTGQ2VWP7 1150 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 CST9LP1Q5W188 147 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 METTL27Q8N6F8 245 aaPredicted RBP16.57■□□□□ 0.24
HMGA1-205ENST00000447654 OR5L1Q8NGL2 311 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 PHF7Q9BWX1 381 aaPredicted RBP16.57■□□□□ 0.24
HMGA1-205ENST00000447654 CDC42EP3Q9UKI2 254 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 CABIN1Q9Y6J0 2220 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 A0A1W2PR77 199 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 FAM166BA8MTA8 275 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 IGHEP01854 428 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 OMGP23515 440 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 DTYMKP23919 212 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 NPBWR2P48146 333 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 GFERP55789 205 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 MEF2BQ02080 365 aaPredicted RBP16.57■□□□□ 0.24
HMGA1-205ENST00000447654 TMEM144Q7Z5S9 345 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 C20orf196Q8IYI0 205 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 SMIM12Q96EX1 92 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 DNAJA3Q96EY1 480 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 GPER1Q99527 375 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 FOXQ1Q9C009 403 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 RPRMQ9NS64 109 aa16.57■□□□□ 0.24
HMGA1-205ENST00000447654 ARID1AO14497 2285 aa16.56■□□□□ 0.24
HMGA1-205ENST00000447654 CACNA1IQ9P0X4 2223 aa16.56■□□□□ 0.24
HMGA1-205ENST00000447654 IGKV1D-8A0A087WSZ0 117 aa16.56■□□□□ 0.24
HMGA1-205ENST00000447654 RNF212BA8MTL3 300 aa16.56■□□□□ 0.24
HMGA1-205ENST00000447654 PIAS2O75928 621 aa16.56■□□□□ 0.24
HMGA1-205ENST00000447654 OR5AU1Q8NGC0 362 aa16.56■□□□□ 0.24
HMGA1-205ENST00000447654 LMX1AQ8TE12 382 aa16.56■□□□□ 0.24
HMGA1-205ENST00000447654 PINX1Q96BK5 328 aaKnown RBP16.56■□□□□ 0.24
HMGA1-205ENST00000447654 NUDT11Q96G61 164 aa16.56■□□□□ 0.24
HMGA1-205ENST00000447654 BET1LQ9NYM9 111 aa16.56■□□□□ 0.24
HMGA1-205ENST00000447654 A0A1W2PP11 408 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 LRRC3CA6NJW4 275 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 PRSS47A8MTI9 375 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 IFNL4K9M1U5 179 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 PRKNO60260 465 aaPredicted RBP16.55■□□□□ 0.24
HMGA1-205ENST00000447654 IL3RAP26951 378 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 APOBEC3AP31941 199 aaPredicted RBP16.55■□□□□ 0.24
HMGA1-205ENST00000447654 HNRNPA3P51991 378 aaKnown RBP16.55■□□□□ 0.24
HMGA1-205ENST00000447654 YPEL3P61236 119 aaPredicted RBP16.55■□□□□ 0.24
HMGA1-205ENST00000447654 FOXL1Q12952 345 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 ODF3L1Q8IXM7 274 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 C1orf174Q8IYL3 243 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 KLHDC1Q8N7A1 406 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 WDFY4Q6ZS81 3184 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 GCH1P30793 250 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 WDFY1Q8IWB7 410 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 TMEM56Q96MV1 263 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 UBE2ZQ9H832 354 aaPredicted RBP16.55■□□□□ 0.24
HMGA1-205ENST00000447654 CENPMQ9NSP4 180 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 TMEM56-RWDD3S4R434 201 aa16.55■□□□□ 0.24
HMGA1-205ENST00000447654 ANKUB1A6NFN9 424 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 NUPR1O60356 82 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 PDGFBP01127 241 aaPredicted RBP16.54■□□□□ 0.24
HMGA1-205ENST00000447654 IGLC2P0DOY2 106 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 IGLC3P0DOY3 106 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 CCL1P22362 96 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 CAPZBP47756 277 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 COMPP49747 757 aaPredicted RBP16.54■□□□□ 0.24
HMGA1-205ENST00000447654 ARF6P62330 175 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 SUMO1P63165 101 aaKnown RBP16.54■□□□□ 0.24
HMGA1-205ENST00000447654 ID3Q02535 119 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 NNATQ16517 81 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 VN1R17PQ8TDU5 208 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 TOMM40LQ969M1 308 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 SPACA7Q96KW9 195 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 CPAMD8Q8IZJ3 1885 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 IGHV5-51A0A0C4DH38 117 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 NKX2-6A6NCS4 301 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 PHF1O43189 567 aaPredicted RBP16.54■□□□□ 0.24
HMGA1-205ENST00000447654 SSSCA1O60232 199 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms