RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 A0A0B4J203 849 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 TRAV40A0A0B4J280 105 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 IGHV1-69DA0A0B4J2H0 117 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 TMEM14DPA8MWL7 114 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 RNASEK-C17orf49H0YIS7 233 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 GABARAPH6UMI1 98 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 GEMIN2O14893 280 aaKnown RBP11.56□□□□□ -0.56
SREBF1-207ENST00000447641 LDLRAD4O15165 306 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 PTTG1O95997 202 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 IGHV1-69P01742 117 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 RBP4P02753 201 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 FPR2P25090 351 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 P2RX3P56373 397 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 EDDM3BP56851 147 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 MPV17LQ2QL34 196 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 HCP5Q6MZN7 132 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 SLC25A38Q96DW6 304 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 Q96M66 194 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 C7orf50Q9BRJ6 194 aaKnown RBP11.56□□□□□ -0.56
SREBF1-207ENST00000447641 PPA2Q9H2U2 334 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 LINC00312Q9Y6C7 94 aa11.56□□□□□ -0.56
SREBF1-207ENST00000447641 MGAM2Q2M2H8 2515 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 TGP01266 2768 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 IGHV3OR16-10A0A075B7F0 116 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 A0A1W2PPH5 198 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 hADV38S2A0JD32 116 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A10PA6NDY2 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A18PA6NE21 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A16PA6NEW6 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A20PA6NIJ5 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A8PA6NJQ4 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A7PA6NKC0 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A22PA8MWA6 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A12PA8MX19 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A5PA8MXJ8 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A23PA8MXZ1 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A15PP0C7V4 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A13PP0C7W8 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A14PP0C7W9 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAM90A24PP0C7X0 464 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 ZNF728P0DKX0 622 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 CGB3P0DN86 165 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 CGB7P0DN87 165 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 VSIG8P0DPA2 414 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 IL7P13232 177 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 MGMTP16455 207 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 CCL3L1P16619 93 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 CDK2P24941 298 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 PRSS3P35030 304 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FAUP35544 74 aaKnown RBP11.55□□□□□ -0.56
SREBF1-207ENST00000447641 GLIPR1P48060 266 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 KCNJ3P48549 501 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 TAS2R20P59543 309 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 ACTBP60709 375 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 ACTG1P63261 375 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 AESQ08117 197 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 EDDM3AQ14507 147 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 ZNF79Q15937 498 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 GPR157Q5UAW9 335 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 TPRX1Q8N7U7 411 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.55□□□□□ -0.56
SREBF1-207ENST00000447641 SMIM4Q8WVI0 70 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 LHX4Q969G2 390 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 SLC6A7Q99884 636 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 THAP7Q9BT49 309 aaPredicted RBP11.55□□□□□ -0.56
SREBF1-207ENST00000447641 BANF2Q9H503 90 aa11.55□□□□□ -0.56
SREBF1-207ENST00000447641 RCC2Q9P258 522 aaKnown RBP11.55□□□□□ -0.56
SREBF1-207ENST00000447641 UBE2J1Q9Y385 318 aaPredicted RBP11.55□□□□□ -0.56
SREBF1-207ENST00000447641 SOX21Q9Y651 276 aaPredicted RBP11.55□□□□□ -0.56
SREBF1-207ENST00000447641 FUOMA2VDF0 154 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 MPIG6BO95866 241 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 GSTP1P09211 210 aaKnown RBP11.54□□□□□ -0.56
SREBF1-207ENST00000447641 CBX5P45973 191 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 UBE2E1P51965 193 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 DLX1P56177 255 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 ERVFRD-1P60508 538 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 RPS27AP62979 156 aaKnown RBP11.54□□□□□ -0.56
SREBF1-207ENST00000447641 MRPS15P82914 257 aaKnown RBP11.54□□□□□ -0.56
SREBF1-207ENST00000447641 TAF9Q16594 264 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 PNLIPRP3Q17RR3 467 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 TRIM16LQ309B1 348 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 PAN3Q58A45 887 aaKnown RBP11.54□□□□□ -0.56
SREBF1-207ENST00000447641 NCR3LG1Q68D85 454 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 SIGIRRQ6IA17 410 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 LYSMD2Q8IV50 215 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 PIP4P2Q8N4L2 257 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 SUMF2Q8NBJ7 301 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 C22orf15Q8WYQ4 148 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 ZNF48Q96MX3 618 aaPredicted RBP11.54□□□□□ -0.56
SREBF1-207ENST00000447641 DPCDQ9BVM2 203 aaPredicted RBP11.54□□□□□ -0.56
SREBF1-207ENST00000447641 SUCNR1Q9BXA5 334 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 MS4A7Q9GZW8 240 aaPredicted RBP11.54□□□□□ -0.56
SREBF1-207ENST00000447641 SPACA1Q9HBV2 294 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 SIRT7Q9NRC8 400 aa11.54□□□□□ -0.56
SREBF1-207ENST00000447641 ZNF107Q9UII5 783 aaPredicted RBP11.54□□□□□ -0.56
SREBF1-207ENST00000447641 TRAV18A0A075B6X5 111 aa11.53□□□□□ -0.56
SREBF1-207ENST00000447641 hCG_1809904A0A1W2PP81 198 aa11.53□□□□□ -0.56
SREBF1-207ENST00000447641 A0A1W2PPE2 198 aa11.53□□□□□ -0.56
SREBF1-207ENST00000447641 A0A1W2PR64 198 aa11.53□□□□□ -0.56
SREBF1-207ENST00000447641 A0A1W2PRV1 198 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms