RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 EXOSC1Q9Y3B2 195 aaKnown RBP14.42□□□□□ -0.1
COL9A1-205ENST00000447041 TRBV5-5A0A0J9YX44 114 aa14.41□□□□□ -0.1
COL9A1-205ENST00000447041 TMEM30CPA0ZSE6 113 aa14.41□□□□□ -0.1
COL9A1-205ENST00000447041 MYL12AP19105 171 aa14.41□□□□□ -0.1
COL9A1-205ENST00000447041 REG1BP48304 166 aa14.41□□□□□ -0.1
COL9A1-205ENST00000447041 ATAD3CQ5T2N8 411 aa14.41□□□□□ -0.1
COL9A1-205ENST00000447041 DMKNQ6E0U4 476 aaPredicted RBP14.41□□□□□ -0.1
COL9A1-205ENST00000447041 FAM53AQ6NSI3 398 aaPredicted RBP14.41□□□□□ -0.1
COL9A1-205ENST00000447041 LINC00596Q86U02 117 aa14.41□□□□□ -0.1
COL9A1-205ENST00000447041 CCDC107Q8WV48 283 aa14.41□□□□□ -0.1
COL9A1-205ENST00000447041 GHSRQ92847 366 aa14.41□□□□□ -0.1
COL9A1-205ENST00000447041 S100A13Q99584 98 aa14.41□□□□□ -0.1
COL9A1-205ENST00000447041 LINC00527Q9UJ94 153 aa14.41□□□□□ -0.1
COL9A1-205ENST00000447041 TRAV8-7A0A075B6U6 113 aa14.4□□□□□ -0.1
COL9A1-205ENST00000447041 IRGMA1A4Y4 181 aa14.4□□□□□ -0.1
COL9A1-205ENST00000447041 C15orf65H3BRN8 121 aa14.4□□□□□ -0.1
COL9A1-205ENST00000447041 FGF16O43320 207 aa14.4□□□□□ -0.1
COL9A1-205ENST00000447041 MPIG6BO95866 241 aa14.4□□□□□ -0.1
COL9A1-205ENST00000447041 RPS11P62280 158 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL9A1-205ENST00000447041 ZNF816Q0VGE8 651 aaPredicted RBP14.4□□□□□ -0.1
COL9A1-205ENST00000447041 LRRC36Q1X8D7 754 aa14.4□□□□□ -0.1
COL9A1-205ENST00000447041 MPV17LQ2QL34 196 aa14.4□□□□□ -0.1
COL9A1-205ENST00000447041 SLC22A6Q4U2R8 563 aa14.4□□□□□ -0.1
COL9A1-205ENST00000447041 ETV3LQ6ZN32 361 aa14.4□□□□□ -0.1
COL9A1-205ENST00000447041 SLC16A12Q6ZSM3 486 aa14.4□□□□□ -0.1
COL9A1-205ENST00000447041 CYGBQ8WWM9 190 aa14.4□□□□□ -0.1
COL9A1-205ENST00000447041 ARL11Q969Q4 196 aa14.4□□□□□ -0.1
COL9A1-205ENST00000447041 PGLYRP3Q96LB9 341 aa14.4□□□□□ -0.1
COL9A1-205ENST00000447041 IGHV3-43A0A0B4J1X8 118 aa14.39□□□□□ -0.11
COL9A1-205ENST00000447041 IGHV3-72A0A0B4J1Y9 119 aa14.39□□□□□ -0.11
COL9A1-205ENST00000447041 IGHV1-3A0A0C4DH29 117 aa14.39□□□□□ -0.11
COL9A1-205ENST00000447041 SDCBPO00560 298 aaPredicted RBP14.39□□□□□ -0.11
COL9A1-205ENST00000447041 IGHV3-43DP0DP04 118 aa14.39□□□□□ -0.11
COL9A1-205ENST00000447041 Q499Y3 187 aa14.39□□□□□ -0.11
COL9A1-205ENST00000447041 C18orf65Q6ZTR6 163 aa14.39□□□□□ -0.11
COL9A1-205ENST00000447041 LINC00482Q8N8I6 264 aa14.39□□□□□ -0.11
COL9A1-205ENST00000447041 NEK7Q8TDX7 302 aa14.39□□□□□ -0.11
COL9A1-205ENST00000447041 TMEM80Q96HE8 168 aa14.39□□□□□ -0.11
COL9A1-205ENST00000447041 RCC1LQ96I51 464 aaKnown RBP14.39□□□□□ -0.11
COL9A1-205ENST00000447041 PAK1IP1Q9NWT1 392 aaPredicted RBP14.39□□□□□ -0.11
COL9A1-205ENST00000447041 PNMA8CA0A1B0GUJ8 204 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 SERPINE3A8MV23 424 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 K7EIL1 84 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 CCRL2O00421 344 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 EBAG9O00559 213 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 ZNF780AO75290 641 aaPredicted RBP14.38□□□□□ -0.11
COL9A1-205ENST00000447041 GTF2F2P13984 249 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 FSTP19883 344 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 GZMHP20718 246 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 KRTAP10-11P60412 298 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 RPL23AP62750 156 aaKnown RBP14.38□□□□□ -0.11
COL9A1-205ENST00000447041 YIF1BQ5BJH7 314 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 ZNF497Q6ZNH5 498 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 MOB3BQ86TA1 216 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 ZNF485Q8NCK3 441 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 CHPT1Q8WUD6 406 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 MUL1Q969V5 352 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 OR14A2Q96R54 314 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 GFOD1Q9NXC2 390 aa14.38□□□□□ -0.11
COL9A1-205ENST00000447041 A0A1W2PPK0 400 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 AIPO00170 330 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 SLC31A2O15432 143 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 GPX5O75715 221 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 IGHG2P01859 326 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 MT-ND4P03905 459 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 GAPDHP04406 335 aaKnown RBP14.37□□□□□ -0.11
COL9A1-205ENST00000447041 EBI3Q14213 229 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 SLC35E3Q7Z769 313 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 MRPL41Q8IXM3 137 aaKnown RBP14.37□□□□□ -0.11
COL9A1-205ENST00000447041 IZUMO1Q8IYV9 350 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 JAGN1Q8N5M9 183 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 LINC00311Q8N616 119 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 OR52M1Q8NGK5 317 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 GGHQ92820 318 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 RBMXL1Q96E39 390 aaKnown RBP14.37□□□□□ -0.11
COL9A1-205ENST00000447041 CYYR1Q96J86 154 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 EAF1Q96JC9 268 aaPredicted RBP14.37□□□□□ -0.11
COL9A1-205ENST00000447041 RCC2Q9P258 522 aaKnown RBP14.37□□□□□ -0.11
COL9A1-205ENST00000447041 CKLFQ9UBR5 152 aa14.37□□□□□ -0.11
COL9A1-205ENST00000447041 MRPS28Q9Y2Q9 187 aaKnown RBP14.37□□□□□ -0.11
COL9A1-205ENST00000447041 TRBV5-7A0A0A0MS05 114 aa14.36□□□□□ -0.11
COL9A1-205ENST00000447041 LINC01548A6NM66 108 aa14.36□□□□□ -0.11
COL9A1-205ENST00000447041 ORC5O43913 435 aa14.36□□□□□ -0.11
COL9A1-205ENST00000447041 HOXD3P31249 432 aaPredicted RBP14.36□□□□□ -0.11
COL9A1-205ENST00000447041 ADARB1P78563 741 aaKnown RBP14.36□□□□□ -0.11
COL9A1-205ENST00000447041 DOC2BQ14184 412 aa14.36□□□□□ -0.11
COL9A1-205ENST00000447041 TTC23Q5W5X9 447 aa14.36□□□□□ -0.11
COL9A1-205ENST00000447041 GLIPR1L1Q6UWM5 242 aa14.36□□□□□ -0.11
COL9A1-205ENST00000447041 C8orf86Q6ZUL3 223 aa14.36□□□□□ -0.11
COL9A1-205ENST00000447041 OR2W3Q7Z3T1 314 aa14.36□□□□□ -0.11
COL9A1-205ENST00000447041 STPG2Q8N412 459 aa14.36□□□□□ -0.11
COL9A1-205ENST00000447041 Q8N6K4 173 aa14.36□□□□□ -0.11
COL9A1-205ENST00000447041 SETD9Q8NE22 299 aa14.36□□□□□ -0.11
COL9A1-205ENST00000447041 OR51D1Q8NGF3 324 aa14.36□□□□□ -0.11
COL9A1-205ENST00000447041 RTN4IP1Q8WWV3 396 aaPredicted RBP14.36□□□□□ -0.11
COL9A1-205ENST00000447041 CHCHD3Q9NX63 227 aaKnown RBP14.36□□□□□ -0.11
COL9A1-205ENST00000447041 NCBP2LA6PVI3 153 aaKnown RBP14.35□□□□□ -0.11
COL9A1-205ENST00000447041 C12orf77C9JDV5 145 aa14.35□□□□□ -0.11
COL9A1-205ENST00000447041 DUS4LO95620 317 aaKnown RBP14.35□□□□□ -0.11
COL9A1-205ENST00000447041 MAS1P04201 325 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms