RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 PET117Q6UWS5 81 aa7.47□□□□□ -1.21
PTPN3-204ENST00000446349 SLC2A9Q9NRM0 540 aa7.47□□□□□ -1.21
PTPN3-204ENST00000446349 SYNGR2O43760 224 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 COX6A1P12074 109 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 HIST1H1BP16401 226 aaKnown RBP7.46□□□□□ -1.21
PTPN3-204ENST00000446349 SLC6A1P30531 599 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 CCDC190Q86UF4 302 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 MAGT1Q9H0U3 335 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 NPY1RP25929 384 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 HTR1DP28221 377 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 TMEM97Q5BJF2 176 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 OR1B1Q8NGR6 318 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 TXNDC17Q9BRA2 123 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 PCGF1Q9BSM1 259 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 SEC11CQ9BY50 192 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 NEU3Q9UQ49 428 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 U3KQ87 197 aa7.46□□□□□ -1.21
PTPN3-204ENST00000446349 ASPDHA6ND91 283 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 HMSDA8MTL9 139 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 BCL3P20749 454 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 PRSS54Q6PEW0 395 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 SSX7Q7RTT5 188 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 MRGPRGQ86SM5 289 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 MUC15Q8N387 334 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 MAGEB4O15481 346 aaPredicted RBP7.46□□□□□ -1.22
PTPN3-204ENST00000446349 PDE6DO43924 150 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 PPYP01298 95 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 LSM11P83369 360 aaKnown RBP eCLIP7.46□□□□□ -1.22
PTPN3-204ENST00000446349 TMED6Q8WW62 240 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 ANAPC16Q96DE5 110 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 ASCL3Q9NQ33 180 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 CBY1Q9Y3M2 126 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 INTS1Q8N201 2190 aaKnown RBP7.46□□□□□ -1.22
PTPN3-204ENST00000446349 A0A1W2PR77 199 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 BMPR1BO00238 502 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 NKX2-8O15522 239 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 SIX6O95475 246 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 TSPOP30536 169 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 TPPP2P59282 170 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 TBC1D26Q86UD7 250 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 CELF2-AS1Q8N7Q2 184 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 PTPRFP10586 1907 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 FAM24AA6NFZ4 105 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 GATCO43716 136 aaKnown RBP7.46□□□□□ -1.22
PTPN3-204ENST00000446349 CPN1P15169 458 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 FSTP19883 344 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 FABP9Q0Z7S8 132 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 GAMTQ14353 236 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 BATFQ16520 125 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 OR2J1Q9GZK6 312 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 MRPS18AQ9NVS2 196 aaKnown RBP7.46□□□□□ -1.22
PTPN3-204ENST00000446349 HS3ST3B1Q9Y662 390 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 A0A0G2JMZ2 1700 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 LRRC37A2A6NM11 1700 aa7.46□□□□□ -1.22
PTPN3-204ENST00000446349 LNP1A1A4G5 178 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 RPL35P42766 123 aaKnown RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 RELQ04864 619 aaPredicted RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 EXOSC2Q13868 293 aaKnown RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 LINC00303Q3SY05 128 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 TSPO2Q5TGU0 170 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 PRR27Q6MZM9 219 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 ZPLD1Q8TCW7 415 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 COPS9Q8WXC6 57 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 CLCF1Q9UBD9 225 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 A0A0J9YW62 118 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 S1PR2O95136 353 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 ISG15P05161 165 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 OR5AC1P0C628 307 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 USF1P22415 310 aaPredicted RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 CD80P33681 288 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 CRYBB2P43320 205 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 RRN3P1Q2M238 152 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 LGALSLQ3ZCW2 172 aaPredicted RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 C16orf47Q6ZP98 133 aaPredicted RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 Q6ZT83 130 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 GLCCI1Q86VQ1 547 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 MSRB3Q8IXL7 192 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 FLRT3Q9NZU0 649 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 HSBP1O75506 76 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 GLRXP35754 106 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 TMEM241Q24JQ0 296 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 Q6ZNX1 250 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 OR5C1Q8NGR4 320 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 NOL4LQ96MY1 436 aaPredicted RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 PLEKHB1Q9UF11 243 aaPredicted RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 TEX50A0A1B0GTY4 177 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 DEFB108AA8MXU0 73 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 B4DEV8 164 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 PYCARD-AS1I3L0S3 204 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 IGHMP01871 453 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 UBE2L3P68036 154 aaKnown RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 DHRS2Q13268 280 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 TEPPQ6URK8 271 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 TMEM123Q8N131 208 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 OR2V2Q96R30 315 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 ANKRD20A5PA0PJZ0 165 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 RECKO95980 971 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 PDGFAP04085 211 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 DEFA6Q01524 100 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms