RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 BAP18Q8IXM2 172 aa14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 MRPL30Q8TCC3 161 aaKnown RBP14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 LRRC46Q96FV0 321 aa14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 CNTNAP3BQ96NU0 1288 aa14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 CNTNAP3Q9BZ76 1288 aa14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 PCDHB10Q9UN67 800 aa14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 BSNQ9UPA5 3926 aa14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 AGPAT2O15120 278 aa14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 NAPSAO96009 420 aa14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 EPHA1P21709 976 aa14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 RPL12P30050 165 aaKnown RBP14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 ZNF83P51522 516 aa14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 PLPPR1Q8TBJ4 325 aa14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 SYT3Q9BQG1 590 aa14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 CYTL1Q9NRR1 136 aa14.28□□□□□ -0.12
LAPTM4B-201ENST00000445593 PTPRQQ9UMZ3 2332 aa14.27□□□□□ -0.12
LAPTM4B-201ENST00000445593 C3orf85A0A1B0GTC6 90 aa14.27□□□□□ -0.12
LAPTM4B-201ENST00000445593 PRR33A8MZF0 331 aa14.27□□□□□ -0.12
LAPTM4B-201ENST00000445593 J3QT63 122 aa14.27□□□□□ -0.12
LAPTM4B-201ENST00000445593 AQP7O14520 342 aa14.27□□□□□ -0.12
LAPTM4B-201ENST00000445593 OR2H2O95918 312 aa14.27□□□□□ -0.12
LAPTM4B-201ENST00000445593 ECI1P42126 302 aa14.27□□□□□ -0.12
LAPTM4B-201ENST00000445593 LIAT1Q6ZQX7 453 aa14.27□□□□□ -0.12
LAPTM4B-201ENST00000445593 DKK4Q9UBT3 224 aa14.27□□□□□ -0.12
LAPTM4B-201ENST00000445593 ERRFI1Q9UJM3 462 aaPredicted RBP14.27□□□□□ -0.12
LAPTM4B-201ENST00000445593 TRAPPC2LQ9UL33 140 aa14.27□□□□□ -0.12
LAPTM4B-201ENST00000445593 KALRNO60229 2985 aa14.27□□□□□ -0.12
LAPTM4B-201ENST00000445593 MPPED1O15442 326 aa14.27□□□□□ -0.13
LAPTM4B-201ENST00000445593 SNAPC5O75971 98 aa14.27□□□□□ -0.13
LAPTM4B-201ENST00000445593 ZP3P21754 424 aa14.27□□□□□ -0.13
LAPTM4B-201ENST00000445593 OMGP23515 440 aa14.27□□□□□ -0.13
LAPTM4B-201ENST00000445593 SNRPEP62304 92 aaKnown RBP14.27□□□□□ -0.13
LAPTM4B-201ENST00000445593 CBLN2Q8IUK8 224 aa14.27□□□□□ -0.13
LAPTM4B-201ENST00000445593 WDR31Q8NA23 367 aa14.27□□□□□ -0.13
LAPTM4B-201ENST00000445593 ERGIC1Q969X5 290 aa14.27□□□□□ -0.13
LAPTM4B-201ENST00000445593 PROCRQ9UNN8 238 aa14.27□□□□□ -0.13
LAPTM4B-201ENST00000445593 CHD8Q9HCK8 2581 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 NKX2-6A6NCS4 301 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 PET100P0DJ07 73 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 HKR1P10072 659 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 MPV17LQ2QL34 196 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 GTF3AQ92664 365 aaKnown RBP14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 MSI2Q96DH6 328 aaKnown RBP14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 OPA3Q9H6K4 179 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 FBXL17Q9UF56 701 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 USF3Q68DE3 2245 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 TRDCB7Z8K6 153 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 ID4P47928 161 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 RAB13P51153 203 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 IGFL2Q6UWQ7 119 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 SEM1Q6ZVN7 128 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 ZNF695Q8IW36 515 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 BVESQ8NE79 360 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 PLPPR2Q96GM1 343 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 PRRX2Q99811 253 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 SLC25A32Q9H2D1 315 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 HRH4Q9H3N8 390 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 DECR2Q9NUI1 292 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 RCC2Q9P258 522 aaKnown RBP14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 KCNS2Q9ULS6 477 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 ZZEF1O43149 2961 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 ZNF705EA8MWA4 302 aaPredicted RBP14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 PROB1E7EW31 1015 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 MLNRO43193 412 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 IL24Q13007 206 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 LDLRAD3Q86YD5 345 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 LGI3Q8N145 548 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 CCDC71LQ8N9Z2 235 aa14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 SNIP1Q8TAD8 396 aaKnown RBP14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 ZNF71Q9NQZ8 489 aaPredicted RBP14.26□□□□□ -0.13
LAPTM4B-201ENST00000445593 A0A1B0GV50 99 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 CEACAM1P13688 526 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 NDUFB7P17568 137 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 TMEM33P57088 247 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 IL15RAQ13261 267 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 SAXO1Q8IYX7 474 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 STARD4Q96DR4 205 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 MEGF10Q96KG7 1140 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 PPP1R3CQ9UQK1 317 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 ATP23Q9Y6H3 246 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 TRBV6-7A0A0A0MS04 114 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 DNASE2O00115 360 aaPredicted RBP14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 TNFSF13O75888 250 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 SSTP61278 116 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 FOXC1Q12948 553 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 SSX9Q7RTT3 188 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 OR10J5Q8NHC4 309 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 SFT2D1Q8WV19 159 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 EDARADDQ8WWZ3 215 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 POM121Q96HA1 1249 aa14.25□□□□□ -0.13
LAPTM4B-201ENST00000445593 TUBAL3A6NHL2 446 aa14.24□□□□□ -0.13
LAPTM4B-201ENST00000445593 SPP1P10451 314 aa14.24□□□□□ -0.13
LAPTM4B-201ENST00000445593 LTC4SQ16873 150 aa14.24□□□□□ -0.13
LAPTM4B-201ENST00000445593 INO80CQ6PI98 192 aaPredicted RBP14.24□□□□□ -0.13
LAPTM4B-201ENST00000445593 BEND4Q6ZU67 534 aa14.24□□□□□ -0.13
LAPTM4B-201ENST00000445593 GLRX2Q9NS18 164 aa14.24□□□□□ -0.13
LAPTM4B-201ENST00000445593 NCOR2Q9Y618 2525 aa14.24□□□□□ -0.13
LAPTM4B-201ENST00000445593 KIR2DS1A0A191URI9 304 aa14.24□□□□□ -0.13
LAPTM4B-201ENST00000445593 M0R1B8 84 aa14.24□□□□□ -0.13
LAPTM4B-201ENST00000445593 DEDDO75618 318 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms