RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 PPT1P50897 306 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 TPRX1Q8N7U7 411 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 MEGF10Q96KG7 1140 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 LMX1BO60663 402 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 LFNGQ8NES3 379 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 SUCNR1Q9BXA5 334 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 NIT2Q9NQR4 276 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 FPR2P25090 351 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 RAG2P55895 527 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 RNF212Q495C1 297 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 MRPL24Q96A35 216 aaKnown RBP12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 LSM2Q9Y333 95 aaKnown RBP12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 INSIG2Q9Y5U4 225 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 MED19A0JLT2 244 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 ZNF705FA8MVS1 300 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 RPL36A-HNRNPH2H7BZ11 118 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 ZNF705DP0CH99 300 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 ZNF705BP0CI00 300 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 UBE2KP61086 200 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 GVQW1Q8N7I0 195 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 HPSE2Q8WWQ2 592 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 PINX1Q96BK5 328 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 POM121L2Q96KW2 1035 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 PLSCR3Q9NRY6 295 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 SLC35D1Q9NTN3 355 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 SIX6O95475 246 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 OR4E1P0C645 316 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 HLA-DRB3P79483 266 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 TLE4Q04727 773 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 PSG7Q13046 419 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 CLINT1Q14677 625 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 NEIL1Q96FI4 390 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 IL36GQ9NZH8 169 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 FAM157AC9JC47 383 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 ADRA2CP18825 462 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 MPV17P39210 176 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 TMEM128Q5BJH2 165 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 CCDC144NLQ6NUI1 221 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 UBAC2Q8NBM4 344 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 ZNF596Q8TC21 504 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 SSC4DQ8WTU2 575 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 CIB3Q96Q77 187 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 C1QTNF5Q9BXJ0 243 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 KCNIP2Q9NS61 270 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 TMEM106BQ9NUM4 274 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 FOXH1O75593 365 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 SPANXN5Q5MJ07 72 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 OR10Z1Q8NGY1 313 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 ZNRF4Q8WWF5 429 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 RASL12Q9NYN1 266 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 FLVCR2Q9UPI3 526 aa12.1□□□□□ -0.47
SMARCA4-204ENST00000444061 OBSL1O75147 1896 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 A0A0B4J2A0 478 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 TAAR5O14804 337 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 OR2H2O95918 312 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 CT45A6P0DMU7 189 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 CT45A5P0DMU8 189 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 CT45A7P0DMV0 189 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 CDKN1AP38936 164 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 FOXG1P55316 489 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 LINC00303Q3SY05 128 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 CT45A1Q5HYN5 189 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 SOHLH1Q5JUK2 328 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 CT45A3Q8NHU0 189 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 FBLIM1Q8WUP2 373 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 FAM168AQ92567 244 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 PGLYRP3Q96LB9 341 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 SHPKQ9UHJ6 478 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 hCG_38984A0A1B0GV85 526 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 CST4P01036 141 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 DTYMKP23919 212 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 KIR2DS2P43631 304 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 CBLN4Q9NTU7 201 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 COL4A3Q01955 1670 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 C17orf100A8MU93 164 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 PPP1R2P9O14990 202 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 NAT1P18440 290 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 RPL11P62913 178 aaKnown RBP12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 H3F3AP84243 136 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 UQCC3Q6UW78 93 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 ACOT7LQ6ZUV0 252 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 MARS2Q96GW9 593 aaKnown RBP12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 TMEM56Q96MV1 263 aa12.09□□□□□ -0.47
SMARCA4-204ENST00000444061 J3QKU1 62 aa12.08□□□□□ -0.47
SMARCA4-204ENST00000444061 SMAD7O15105 426 aaKnown RBP12.08□□□□□ -0.47
SMARCA4-204ENST00000444061 LPAR6P43657 344 aa12.08□□□□□ -0.47
SMARCA4-204ENST00000444061 LYG2Q86SG7 212 aa12.08□□□□□ -0.47
SMARCA4-204ENST00000444061 WFIKKN1Q96NZ8 548 aa12.08□□□□□ -0.47
SMARCA4-204ENST00000444061 SOX7Q9BT81 388 aa12.08□□□□□ -0.47
SMARCA4-204ENST00000444061 TGOLN2O43493 480 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 UBE2V2Q15819 145 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 KCNIP4Q6PIL6 250 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 OR1S2Q8NGQ3 325 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 OR5P3Q8WZ94 311 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 PTX4Q96A99 478 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 C12orf57Q99622 126 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 ZNF705GA8MUZ8 300 aaPredicted RBP12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 DAOP14920 347 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 HOXD11P31277 338 aaPredicted RBP12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 YIPF5Q969M3 257 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms