RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 ARGFXA6NJG6 315 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 PRH1P02810 166 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 F2RP25116 425 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 ZNF266Q14584 549 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 CLINT1Q14677 625 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 MYPOPQ86VE0 399 aaPredicted RBP13.61□□□□□ -0.23
SHQ1-202ENST00000444040 IL22RA1Q8N6P7 574 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 J3QT63 122 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 PEA15Q15121 130 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 ETV3LQ6ZN32 361 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 TMEM182Q6ZP80 229 aaPredicted RBP13.61□□□□□ -0.23
SHQ1-202ENST00000444040 WDR86Q86TI4 376 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 VASH2Q86V25 355 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 ZDHHC11Q9H8X9 412 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 GLRX2Q9NS18 164 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 KLF2Q9Y5W3 355 aaPredicted RBP13.61□□□□□ -0.23
SHQ1-202ENST00000444040 RFNGQ9Y644 331 aa13.61□□□□□ -0.23
SHQ1-202ENST00000444040 COLCA2A8K830 154 aa13.6□□□□□ -0.23
SHQ1-202ENST00000444040 ATP6V0CP27449 155 aa13.6□□□□□ -0.23
SHQ1-202ENST00000444040 HMGN3Q15651 99 aa13.6□□□□□ -0.23
SHQ1-202ENST00000444040 OR10J5Q8NHC4 309 aa13.6□□□□□ -0.23
SHQ1-202ENST00000444040 RXFP4Q8TDU9 374 aa13.6□□□□□ -0.23
SHQ1-202ENST00000444040 SLC25A31Q9H0C2 315 aa13.6□□□□□ -0.23
SHQ1-202ENST00000444040 TAAR3PQ9P1P4 343 aa13.6□□□□□ -0.23
SHQ1-202ENST00000444040 RNF115Q9Y4L5 304 aa13.6□□□□□ -0.23
SHQ1-202ENST00000444040 R4GN57 208 aa13.6□□□□□ -0.23
SHQ1-202ENST00000444040 MED19A0JLT2 244 aaPredicted RBP13.6□□□□□ -0.23
SHQ1-202ENST00000444040 ZNF14P17017 642 aaPredicted RBP13.6□□□□□ -0.23
SHQ1-202ENST00000444040 OMGP23515 440 aa13.6□□□□□ -0.23
SHQ1-202ENST00000444040 ZNF766Q5HY98 468 aa13.6□□□□□ -0.23
SHQ1-202ENST00000444040 ERRFI1Q9UJM3 462 aaPredicted RBP13.6□□□□□ -0.23
SHQ1-202ENST00000444040 A0A0G2JRQ6 117 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 DEGS1O15121 323 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 CRYBA1P05813 215 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 CELA3BP08861 270 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 MMP9P14780 707 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 ZNF44P15621 663 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 SAV1Q9H4B6 383 aaPredicted RBP13.59□□□□□ -0.23
SHQ1-202ENST00000444040 KNTC1P50748 2209 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 NPIPB11E5RHQ5 1161 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 PPP1CCP36873 323 aaKnown RBP13.59□□□□□ -0.23
SHQ1-202ENST00000444040 PAX9P55771 341 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 ERVK11-1P61568 191 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 VAMP2P63027 116 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 TBC1D28Q2M2D7 210 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 OR5C1Q8NGR4 320 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 EIF5A2Q9GZV4 153 aaKnown RBP13.59□□□□□ -0.23
SHQ1-202ENST00000444040 NCOR1O75376 2440 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 J3QW42 95 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 CHST1O43916 411 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 IGLV2-14P01704 120 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 WNT2P09544 360 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 FAM213BQ8TBF2 198 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 SMCO4Q9NRQ5 59 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 TREM2Q9NZC2 230 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 OR1A1Q9P1Q5 309 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 ZNF175Q9Y473 711 aa13.59□□□□□ -0.23
SHQ1-202ENST00000444040 DOCK7Q96N67 2140 aa13.58□□□□□ -0.23
SHQ1-202ENST00000444040 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.58□□□□□ -0.24
SHQ1-202ENST00000444040 SMPD2O60906 423 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 PAX6P26367 422 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 RAB13P51153 203 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 ARG2P78540 354 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 OR2G3Q8NGZ4 309 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 RTL8AQ9BWD3 113 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 A0A1W2PR80 420 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 LRP5LA4QPB2 252 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 KIAA1324LA8MWY0 1029 aaPredicted RBP13.58□□□□□ -0.24
SHQ1-202ENST00000444040 CST7O76096 145 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 NXPH3O95157 252 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 DYNLT3P51808 116 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 BAXQ07812 192 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 KDF1Q8NAX2 398 aaPredicted RBP13.58□□□□□ -0.24
SHQ1-202ENST00000444040 SCCPDHQ8NBX0 429 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 GMPPAQ96IJ6 420 aaPredicted RBP13.58□□□□□ -0.24
SHQ1-202ENST00000444040 ABHD14AQ9BUJ0 271 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 OR2J1Q9GZK6 312 aa13.58□□□□□ -0.24
SHQ1-202ENST00000444040 A0A1B0GW64 132 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 OR2H2O95918 312 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 PSG2P11465 335 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 EPHA1P21709 976 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 AVPI1Q5T686 147 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 TMPRSS7Q7RTY8 843 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 OR10V1Q8NGI7 309 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 GPR146Q96CH1 333 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 TRAV39A0A0B4J263 110 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 UMAD1C9J7I0 102 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 SLC33A1O00400 549 aaPredicted RBP13.57□□□□□ -0.24
SHQ1-202ENST00000444040 S100GP29377 79 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 MDH2P40926 338 aaKnown RBP13.57□□□□□ -0.24
SHQ1-202ENST00000444040 SOX8P57073 446 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 ERVS71-1P61550 626 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 TESK1Q15569 626 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 ZNF497Q6ZNH5 498 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 LINC00518Q8N0U6 118 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 ZNF295-AS1Q8N0V1 137 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 TMEM178AQ8NBL3 297 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 LFNGQ8NES3 379 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 OR51H1Q8NH63 302 aa13.57□□□□□ -0.24
SHQ1-202ENST00000444040 IL1F10Q8WWZ1 152 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms