RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 SLC35E4Q6ICL7 350 aa12.25□□□□□ -0.45
LINC00299-202ENST00000442956 OR11L1Q8NGX0 322 aa12.25□□□□□ -0.45
LINC00299-202ENST00000442956 OR10J5Q8NHC4 309 aa12.25□□□□□ -0.45
LINC00299-202ENST00000442956 Q8TCH9 128 aa12.25□□□□□ -0.45
LINC00299-202ENST00000442956 PIK3IP1Q96FE7 263 aa12.25□□□□□ -0.45
LINC00299-202ENST00000442956 CABLES2Q9BTV7 478 aa12.25□□□□□ -0.45
LINC00299-202ENST00000442956 SHARPINQ9H0F6 387 aa12.25□□□□□ -0.45
LINC00299-202ENST00000442956 TRBV6-7A0A0A0MS04 114 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 TEX13DA0A0J9YY54 714 aaPredicted RBP12.24□□□□□ -0.45
LINC00299-202ENST00000442956 CRYM-AS1A6NIL9 109 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 ZNF737O75373 536 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 CYB5R3P00387 301 aaPredicted RBP12.24□□□□□ -0.45
LINC00299-202ENST00000442956 TNFRSF1AP19438 455 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 APOBEC3AP31941 199 aaPredicted RBP12.24□□□□□ -0.45
LINC00299-202ENST00000442956 C4orf17Q53FE4 359 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 PHLDA2Q53GA4 152 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 LAMTOR1Q6IAA8 161 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 LPCAT3Q6P1A2 487 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 TGIF2LYQ8IUE0 185 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 SGPP2Q8IWX5 399 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 GALNT11Q8NCW6 608 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 GRPEL2Q8TAA5 225 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 UBALD1Q8TB05 177 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 TAF9BQ9HBM6 251 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 SLC2A9Q9NRM0 540 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 CACNA1DQ01668 2161 aa12.24□□□□□ -0.45
LINC00299-202ENST00000442956 DBX1A6NMT0 343 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 HLA-GP17693 338 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 TESK1Q15569 626 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 KRBOX4Q5JUW0 171 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 ZBTB8BQ8NAP8 495 aaPredicted RBP12.23□□□□□ -0.45
LINC00299-202ENST00000442956 COQ8AQ8NI60 647 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 RTN4IP1Q8WWV3 396 aaPredicted RBP12.23□□□□□ -0.45
LINC00299-202ENST00000442956 ASB13Q8WXK3 278 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 RSRP1Q9BUV0 290 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 SEBOXQ9HB31 216 aaPredicted RBP12.23□□□□□ -0.45
LINC00299-202ENST00000442956 DYNLRB1Q9NP97 96 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 CISD1Q9NZ45 108 aaKnown RBP12.23□□□□□ -0.45
LINC00299-202ENST00000442956 HSPB11Q9Y547 144 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 ZFYVE26Q68DK2 2539 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 CACNA1BQ00975 2339 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 SPTBN1Q01082 2364 aaKnown RBP12.23□□□□□ -0.45
LINC00299-202ENST00000442956 FAM25EA8MYX2 175 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 ZG16O60844 167 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 IFNA2P01563 188 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 IRF2P14316 349 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 HMGN3Q15651 99 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 FAM209AQ5JX71 171 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 C9orf62Q8N4C0 152 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 ANGPTL6Q8NI99 470 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 SECTM1Q8WVN6 248 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 EGLN1Q9GZT9 426 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 DCAF16Q9NXF7 216 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 KCNIP1Q9NZI2 227 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 OR1A1Q9P1Q5 309 aa12.23□□□□□ -0.45
LINC00299-202ENST00000442956 A0A0B4J2A0 478 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 IGKV1D-13A0A0B4J2D9 117 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 IGKV1-13P0DP09 117 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 GNRHRP30968 328 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 GLIPR1P48060 266 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 EFNB3Q15768 340 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 MST1LQ2TV78 715 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 H1FOOQ8IZA3 346 aaPredicted RBP12.22□□□□□ -0.45
LINC00299-202ENST00000442956 TPRX1Q8N7U7 411 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 FAM222BQ8WU58 562 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 PDCD10Q9BUL8 212 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 SAP30LQ9HAJ7 183 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 SHPKQ9UHJ6 478 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 DEFB108AA8MXU0 73 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 SNRPD2P62316 118 aaKnown RBP12.22□□□□□ -0.45
LINC00299-202ENST00000442956 EDDM3AQ14507 147 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 ZNF565Q8N9K5 539 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 ZNRF1Q8ND25 227 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 DEFB108BQ8NET1 73 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 LILRB1Q8NHL6 650 aaPredicted RBP12.22□□□□□ -0.45
LINC00299-202ENST00000442956 SEC22AQ96IW7 307 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 SLC5A7Q9GZV3 580 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 NAA60Q9H7X0 242 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 OR2W1Q9Y3N9 320 aa12.22□□□□□ -0.45
LINC00299-202ENST00000442956 LRRC30A6NM36 301 aa12.21□□□□□ -0.45
LINC00299-202ENST00000442956 B9A039 149 aa12.21□□□□□ -0.45
LINC00299-202ENST00000442956 C12orf77C9JDV5 145 aa12.21□□□□□ -0.45
LINC00299-202ENST00000442956 NPIPB11E5RHQ5 1161 aa12.21□□□□□ -0.45
LINC00299-202ENST00000442956 RGS11O94810 467 aa12.21□□□□□ -0.45
LINC00299-202ENST00000442956 SNX22Q96L94 193 aa12.21□□□□□ -0.45
LINC00299-202ENST00000442956 TMEM246Q9BRR3 403 aa12.21□□□□□ -0.45
LINC00299-202ENST00000442956 MS4A5Q9H3V2 200 aa12.21□□□□□ -0.45
LINC00299-202ENST00000442956 KCNIP3Q9Y2W7 256 aa12.21□□□□□ -0.45
LINC00299-202ENST00000442956 C13orf42A0A1B0GVH6 325 aa12.21□□□□□ -0.46
LINC00299-202ENST00000442956 OOEPA6NGQ2 149 aa12.21□□□□□ -0.46
LINC00299-202ENST00000442956 HSPA12AO43301 675 aa12.21□□□□□ -0.46
LINC00299-202ENST00000442956 ADAP1O75689 374 aa12.21□□□□□ -0.46
LINC00299-202ENST00000442956 CLDN14O95500 239 aa12.21□□□□□ -0.46
LINC00299-202ENST00000442956 IFITM2Q01629 132 aa12.21□□□□□ -0.46
LINC00299-202ENST00000442956 PAX5Q02548 391 aa12.21□□□□□ -0.46
LINC00299-202ENST00000442956 SRSF4Q08170 494 aaKnown RBP12.21□□□□□ -0.46
LINC00299-202ENST00000442956 STUMQ69YW2 141 aa12.21□□□□□ -0.46
LINC00299-202ENST00000442956 CCDC71LQ8N9Z2 235 aa12.21□□□□□ -0.46
LINC00299-202ENST00000442956 OR1L1Q8NH94 360 aa12.21□□□□□ -0.46
LINC00299-202ENST00000442956 PPP1R35Q8TAP8 253 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms