RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 RAI2Q9Y5P3 530 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 PLXNA3P51805 1871 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 TRAV38-1A0A0B4J264 116 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 IFITM5A6NNB3 132 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 RAMP2O60895 175 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 ELANEP08246 267 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 ADRA2AP08913 450 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 CT45A8P0DMV1 189 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 CT45A9P0DMV2 189 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 AGTR1P30556 359 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 BATFQ16520 125 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 TIGITQ495A1 244 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 CT45A2Q5DJT8 189 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 OR10K2Q6IF99 312 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 Q71RC1 249 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-206ENST00000441438 BCL6BQ8N143 479 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-206ENST00000441438 OR1J2Q8NGS2 313 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 SEC22AQ96IW7 307 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 NRTNQ99748 197 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 UQCC1Q9NVA1 299 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 OR1A2Q9Y585 309 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 MYLKQ15746 1914 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 CHD7Q9P2D1 2997 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 TM4SF5O14894 197 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 TNFRSF1BP20333 461 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 POLR2JP52435 117 aaKnown RBP8.94□□□□□ -0.98
SYNE2-206ENST00000441438 ADAM8P78325 824 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 IAH1Q2TAA2 248 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-206ENST00000441438 SYT14P1Q58G82 188 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 LIAT1Q6ZQX7 453 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 ZNF519Q8TB69 540 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 CNIH3Q8TBE1 160 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 SSMEM1Q8WWF3 244 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 DPCDQ9BVM2 203 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-206ENST00000441438 BOKQ9UMX3 212 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-206ENST00000441438 BTRCQ9Y297 605 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 ORC6Q9Y5N6 252 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 DAPL1A0PJW8 107 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 CEACAM18A8MTB9 384 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 SP1P08047 785 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 NMBP08949 121 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 COL8A1P27658 744 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 TGFBR3Q03167 851 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 IHHQ14623 411 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 CDSNQ15517 529 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 TRIP6Q15654 476 aaKnown RBP8.93□□□□□ -0.98
SYNE2-206ENST00000441438 FER1L6-AS1Q8NA97 138 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 OR5A2Q8NGI9 324 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 RNASE7Q9H1E1 156 aaKnown RBP8.93□□□□□ -0.98
SYNE2-206ENST00000441438 ZNF665Q9H7R5 613 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 KLK11Q9UBX7 282 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 PRNDQ9UKY0 176 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 A0A0C4DFX4 3053 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 J3KT08 172 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 GZMBP10144 247 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 PRKACGP22612 351 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 RPS25P62851 125 aaKnown RBP8.93□□□□□ -0.98
SYNE2-206ENST00000441438 ATXN7L3Q14CW9 347 aaPredicted RBP8.93□□□□□ -0.98
SYNE2-206ENST00000441438 HBMQ6B0K9 141 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 C5orf17Q8NAS9 161 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 OR4K1Q8NGD4 311 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 OR2T4Q8NH00 348 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 SECTM1Q8WVN6 248 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 PPCDCQ96CD2 204 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 SPATA25Q9BR10 227 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 SH2D2AQ9NP31 389 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 MRPL27Q9P0M9 148 aaKnown RBP8.93□□□□□ -0.98
SYNE2-206ENST00000441438 SZT2Q5T011 3432 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 MYO9BQ13459 2157 aa8.93□□□□□ -0.98
SYNE2-206ENST00000441438 PRAMEF33A0A0G2JMD5 474 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 TSPAN11A1L157 253 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 GAGE12BA1L429 117 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 E7EQ34 232 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 OR5G3P0C626 314 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 ZGLP1P0C6A0 271 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 PVRP15151 417 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 RUNX3Q13761 415 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 GLT8D1Q68CQ7 371 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 FAM231DQ6ZW35 169 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 MYEOVQ96EZ4 313 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 TMEM101Q96IK0 257 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 MACROD1Q9BQ69 325 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 ANAPC13Q9BS18 74 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 DNAJB12Q9NXW2 375 aaKnown RBP8.92□□□□□ -0.98
SYNE2-206ENST00000441438 TET1Q8NFU7 2136 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 GAGE12JA6NER3 117 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 INMT-MINDY4F8WBC2 141 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 GAGE7O76087 117 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 CTSDP07339 412 aaPredicted RBP8.92□□□□□ -0.98
SYNE2-206ENST00000441438 GAGE12FP0CL80 117 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 GAGE12GP0CL81 117 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 GAGE12IP0CL82 117 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 PSMB9P28065 219 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 RPL4P36578 427 aaKnown RBP8.92□□□□□ -0.98
SYNE2-206ENST00000441438 OR1D4P47884 311 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 HCCSP53701 268 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 LSM3P62310 102 aaKnown RBP8.92□□□□□ -0.98
SYNE2-206ENST00000441438 MEF2CQ06413 473 aaPredicted RBP8.92□□□□□ -0.98
SYNE2-206ENST00000441438 GAGE4Q13068 117 aa8.92□□□□□ -0.98
SYNE2-206ENST00000441438 CD300EQ496F6 205 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms