RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TMEM18Q96B42 140 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 ATP5SQ99766 215 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 TMEM222Q9H0R3 208 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 VDAC3Q9Y277 283 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 CEP250Q9BV73 2442 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 A0A0U1RQV5 110 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 H3BML4 177 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 MPPED1O15442 326 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 OR4A8P0C604 315 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 NR2C1P13056 603 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 FAHP16930 419 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 IL24Q13007 206 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 CLN3Q13286 438 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 FAM185AQ8N0U4 392 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 IL22RA1Q8N6P7 574 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 PIGTQ969N2 578 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 TMEM56Q96MV1 263 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 MAGT1Q9H0U3 335 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 GAB2Q9UQC2 676 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 TMEM56-RWDD3S4R434 201 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 EXPH5Q8NEV8 1989 aa10.25□□□□□ -0.77
LTBR-203ENST00000441074 SPENQ96T58 3664 aaKnown RBP10.25□□□□□ -0.77
LTBR-203ENST00000441074 IGLV3-32A0A0A0MS00 114 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 NTN3O00634 580 aaPredicted RBP10.24□□□□□ -0.77
LTBR-203ENST00000441074 HERV-K104P61576 105 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 ID3Q02535 119 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 GAGE1Q13065 139 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 MYBPHQ13203 477 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 MPV17LQ2QL34 196 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 PLPPR5Q32ZL2 321 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 CXorf66Q5JRM2 361 aaPredicted RBP10.24□□□□□ -0.77
LTBR-203ENST00000441074 DCAF10Q5QP82 559 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 Q6ZSR3 168 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 TMEM217Q8N7C4 229 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 TMEM170AQ8WVE7 144 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 C10orf35Q96D05 121 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 ZNF286AQ9HBT8 521 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 DCHS1Q96JQ0 3298 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 ZFP92A6NM28 416 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 TRAF3IP2O43734 574 aaPredicted RBP10.24□□□□□ -0.77
LTBR-203ENST00000441074 TMEM50AO95807 157 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 CELA2AP08217 269 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 FGF5P12034 268 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 P2RY6Q15077 328 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 C1orf194Q5T5A4 169 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 ZNF787Q6DD87 383 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 ZNF66Q6ZN08 573 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 ANKRD37Q7Z713 158 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 ZNF695Q8IW36 515 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 MBD3L1Q8WWY6 194 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 ZNF160Q9HCG1 818 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 KLRF1Q9NZS2 232 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 MYOTQ9UBF9 498 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 PIGLQ9Y2B2 252 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 GOLT1BQ9Y3E0 138 aa10.24□□□□□ -0.77
LTBR-203ENST00000441074 CLEC18AA5D8T8 446 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 TMEM210A6NLX4 147 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 PPP5D1E7EU14 171 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 M0QZK8 103 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 DLEU1O43261 78 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 GGCTO75223 188 aaKnown RBP10.23□□□□□ -0.77
LTBR-203ENST00000441074 ZNF883P0CG24 379 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 CD59P13987 128 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 AADACP22760 399 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 ZNF154Q13106 437 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 CDCP2Q5VXM1 449 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 TEX38Q6PEX7 206 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 CENPVQ7Z7K6 275 aaPredicted RBP10.23□□□□□ -0.77
LTBR-203ENST00000441074 MRPL52Q86TS9 123 aaKnown RBP10.23□□□□□ -0.77
LTBR-203ENST00000441074 SELENOHQ8IZQ5 122 aaKnown RBP10.23□□□□□ -0.77
LTBR-203ENST00000441074 CLEC18CQ8NCF0 446 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 OR2V1Q8NHB1 315 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 ZNF665Q9H7R5 613 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 CBLN4Q9NTU7 201 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 LAMP3Q9UQV4 416 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 UBE2J1Q9Y385 318 aaPredicted RBP10.23□□□□□ -0.77
LTBR-203ENST00000441074 CNOT1A5YKK6 2376 aaKnown RBP10.23□□□□□ -0.77
LTBR-203ENST00000441074 AHCTF1Q8WYP5 2266 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 IFNA5P01569 189 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 CD55P08174 381 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 FKBP2P26885 142 aaKnown RBP10.23□□□□□ -0.77
LTBR-203ENST00000441074 FAM3BP58499 235 aaPredicted RBP10.23□□□□□ -0.77
LTBR-203ENST00000441074 PMS2P11Q13670 270 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 EXT1Q16394 746 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 WDR25Q64LD2 544 aaPredicted RBP10.23□□□□□ -0.77
LTBR-203ENST00000441074 C16orf82Q7Z2V1 217 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 THNSL2Q86YJ6 484 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 C17orf78Q8N4C9 275 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 NFAM1Q8NET5 270 aaPredicted RBP10.23□□□□□ -0.77
LTBR-203ENST00000441074 OR51G1Q8NGK1 321 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 OXGR1Q96P68 337 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 SIGLEC12Q96PQ1 595 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 AGMATQ9BSE5 352 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 TMEM208Q9BTX3 173 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 ZNF581Q9P0T4 197 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 NAT8Q9UHE5 227 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 BOD1L1Q8NFC6 3051 aa10.23□□□□□ -0.77
LTBR-203ENST00000441074 KIR2DL5BA0A0G2JN68 375 aa10.22□□□□□ -0.77
LTBR-203ENST00000441074 KIR2DL5BA0A0G2JPC4 375 aa10.22□□□□□ -0.77
LTBR-203ENST00000441074 DUXBA0A1W2PPF3 345 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms