RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 ST6GALNAC6Q969X2 333 aa16■□□□□ 0.15
TRIM39-210ENST00000440271 RBMXL1Q96E39 390 aaKnown RBP16■□□□□ 0.15
TRIM39-210ENST00000440271 FAM118AQ9NWS6 357 aa16■□□□□ 0.15
TRIM39-210ENST00000440271 VSIG4Q9Y279 399 aa16■□□□□ 0.15
TRIM39-210ENST00000440271 TCRBV3S1A0A5B6 114 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 OVOL1O14753 267 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 GP9P14770 177 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 GZMHP20718 246 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 KCNJ3P48549 501 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 GNB1P62873 340 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 GNGT1P63211 74 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 TMED1Q13445 227 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 FLOT2Q14254 428 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 TMEM65Q6PI78 240 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 ADAMTSL5Q6ZMM2 481 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 KCTD20Q7Z5Y7 419 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 OR5B12Q96R08 314 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 CHCHD6Q9BRQ6 235 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 STARD9Q9P2P6 4700 aa15.99■□□□□ 0.15
TRIM39-210ENST00000440271 TRIM64CA6NLI5 447 aa15.98■□□□□ 0.15
TRIM39-210ENST00000440271 SAP30O75446 220 aa15.98■□□□□ 0.15
TRIM39-210ENST00000440271 PPIFP30405 207 aaKnown RBP15.98■□□□□ 0.15
TRIM39-210ENST00000440271 CCR9P51686 369 aa15.98■□□□□ 0.15
TRIM39-210ENST00000440271 IL13RA2Q14627 380 aa15.98■□□□□ 0.15
TRIM39-210ENST00000440271 ZSCAN26Q16670 478 aa15.98■□□□□ 0.15
TRIM39-210ENST00000440271 ZNF691Q5VV52 312 aa15.98■□□□□ 0.15
TRIM39-210ENST00000440271 KDM4DQ6B0I6 523 aa15.98■□□□□ 0.15
TRIM39-210ENST00000440271 C8orf31Q8N9H6 132 aa15.98■□□□□ 0.15
TRIM39-210ENST00000440271 OR52M1Q8NGK5 317 aa15.98■□□□□ 0.15
TRIM39-210ENST00000440271 TM2D3Q9BRN9 247 aa15.98■□□□□ 0.15
TRIM39-210ENST00000440271 CSMD3Q7Z407 3707 aa15.97■□□□□ 0.15
TRIM39-210ENST00000440271 SDCBPO00560 298 aaPredicted RBP15.97■□□□□ 0.15
TRIM39-210ENST00000440271 HTR1AP08908 422 aa15.97■□□□□ 0.15
TRIM39-210ENST00000440271 IL3RAP26951 378 aa15.97■□□□□ 0.15
TRIM39-210ENST00000440271 PIGYQ3MUY2 71 aa15.97■□□□□ 0.15
TRIM39-210ENST00000440271 PXT1Q8NFP0 134 aa15.97■□□□□ 0.15
TRIM39-210ENST00000440271 EME1Q96AY2 570 aa15.97■□□□□ 0.15
TRIM39-210ENST00000440271 EDA2RQ9HAV5 297 aa15.97■□□□□ 0.15
TRIM39-210ENST00000440271 ZNF107Q9UII5 783 aaPredicted RBP15.97■□□□□ 0.15
TRIM39-210ENST00000440271 WSB1Q9Y6I7 421 aa15.97■□□□□ 0.15
TRIM39-210ENST00000440271 OR4C45A6NMZ5 311 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 G3V2T6 193 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 C15orf65H3BRN8 121 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 SULT1B1O43704 296 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 POLR2IP36954 125 aaKnown RBP15.96■□□□□ 0.15
TRIM39-210ENST00000440271 GYS2P54840 703 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 GABPB1Q06547 395 aaPredicted RBP15.96■□□□□ 0.15
TRIM39-210ENST00000440271 SERPINA12Q8IW75 414 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 SUMF2Q8NBJ7 301 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 OR5D14Q8NGL3 314 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 OR8J1Q8NGP2 316 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 UBALD1Q8TB05 177 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 DLX4Q92988 240 aaPredicted RBP15.96■□□□□ 0.15
TRIM39-210ENST00000440271 RFKQ969G6 155 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 ARL11Q969Q4 196 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 ISOC1Q96CN7 298 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 DPCDQ9BVM2 203 aaPredicted RBP15.96■□□□□ 0.15
TRIM39-210ENST00000440271 CHCHD3Q9NX63 227 aaKnown RBP15.96■□□□□ 0.15
TRIM39-210ENST00000440271 ZNF581Q9P0T4 197 aa15.96■□□□□ 0.15
TRIM39-210ENST00000440271 G3V318 75 aa15.95■□□□□ 0.14
TRIM39-210ENST00000440271 LDLRAD4O15165 306 aa15.95■□□□□ 0.14
TRIM39-210ENST00000440271 SLC16A6O15403 523 aa15.95■□□□□ 0.14
TRIM39-210ENST00000440271 IGLV1-40P01703 118 aa15.95■□□□□ 0.14
TRIM39-210ENST00000440271 SLC2A2P11168 524 aaPredicted RBP15.95■□□□□ 0.14
TRIM39-210ENST00000440271 OR10K1Q8NGX5 313 aa15.95■□□□□ 0.14
TRIM39-210ENST00000440271 GFOD1Q9NXC2 390 aa15.95■□□□□ 0.14
TRIM39-210ENST00000440271 ENOPH1Q9UHY7 261 aa15.95■□□□□ 0.14
TRIM39-210ENST00000440271 IGHV3-43A0A0B4J1X8 118 aa15.94■□□□□ 0.14
TRIM39-210ENST00000440271 DAPL1A0PJW8 107 aa15.94■□□□□ 0.14
TRIM39-210ENST00000440271 IGHV3-43DP0DP04 118 aa15.94■□□□□ 0.14
TRIM39-210ENST00000440271 VHLP40337 213 aa15.94■□□□□ 0.14
TRIM39-210ENST00000440271 RAB9AP51151 201 aa15.94■□□□□ 0.14
TRIM39-210ENST00000440271 ALKBH1Q13686 389 aaKnown RBP15.94■□□□□ 0.14
TRIM39-210ENST00000440271 GALEQ14376 348 aa15.94■□□□□ 0.14
TRIM39-210ENST00000440271 LPCAT4Q643R3 524 aa15.94■□□□□ 0.14
TRIM39-210ENST00000440271 PARP16Q8N5Y8 322 aa15.94■□□□□ 0.14
TRIM39-210ENST00000440271 OR6Q1Q8NGQ2 317 aa15.94■□□□□ 0.14
TRIM39-210ENST00000440271 OR51J1Q9H342 316 aa15.94■□□□□ 0.14
TRIM39-210ENST00000440271 NKX1-2Q9UD57 310 aaPredicted RBP15.94■□□□□ 0.14
TRIM39-210ENST00000440271 HYDINQ4G0P3 5121 aa15.94■□□□□ 0.14
TRIM39-210ENST00000440271 TMEM30CPA0ZSE6 113 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 MAGEA13PA6NCF6 341 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 FAM90A10PA6NDY2 464 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 J3QLW9 94 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 GABRPO00591 440 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 SLC31A2O15432 143 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 TXNL1O43396 289 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 ZNF19P17023 458 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 MYF6P23409 242 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 SLURP1P55000 103 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 RSU1Q15404 277 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 SRSF7Q16629 238 aaKnown RBP eCLIP15.93■□□□□ 0.14
TRIM39-210ENST00000440271 SLC25A48Q6ZT89 311 aaKnown RBP15.93■□□□□ 0.14
TRIM39-210ENST00000440271 TNFAIP8L1Q8WVP5 186 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 PELI1Q96FA3 418 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 CIB1Q99828 191 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 ALX4Q9H161 411 aaPredicted RBP15.93■□□□□ 0.14
TRIM39-210ENST00000440271 GHITMQ9H3K2 345 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 POMPQ9Y244 141 aa15.93■□□□□ 0.14
TRIM39-210ENST00000440271 J3QRE1 110 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms